RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PRKG2Q13237 762 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 MORF4L2Q15014 288 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 TYSND1Q2T9J0 566 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 BBS9Q3SYG4 887 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 ASZ1Q8WWH4 475 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 RAB33BQ9H082 229 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 SRMSQ9H3Y6 488 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 C20orf96Q9NUD7 363 aaPredicted RBP27.45■■□□□ 1.98
SSBP4-206ENST00000599699 FOXJ2Q9P0K8 574 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 ZCWPW2A0A1B0GU75 182 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 OR5K3A6NET4 321 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 B4E171 279 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 C9orf172C9J069 976 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 BHMG1C9JSJ3 638 aaPredicted RBP27.44■■□□□ 1.98
SSBP4-206ENST00000599699 TOX3O15405 576 aaPredicted RBP27.44■■□□□ 1.98
SSBP4-206ENST00000599699 KLK10O43240 276 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 ANKRD34CP0C6C1 535 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 RPS3P23396 243 aaKnown RBP eCLIP27.44■■□□□ 1.98
SSBP4-206ENST00000599699 TSPAN7P41732 249 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 PPP1CAP62136 330 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 DHX9Q08211 1270 aaKnown RBP27.44■■□□□ 1.98
SSBP4-206ENST00000599699 LONRF1Q17RB8 773 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 ZNF470Q6ECI4 717 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 CILP2Q8IUL8 1156 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 SPACA3Q8IXA5 215 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 SPATA4Q8NEY3 305 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 GSDMBQ8TAX9 411 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 LPGAT1Q92604 370 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 SNF8Q96H20 258 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 C16orf45Q96MC5 204 aaPredicted RBP27.44■■□□□ 1.98
SSBP4-206ENST00000599699 VPS9D1Q9Y2B5 631 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 CRYL1Q9Y2S2 319 aa27.44■■□□□ 1.98
SSBP4-206ENST00000599699 EFCAB8A8MWE9 144 aa27.43■■□□□ 1.98
SSBP4-206ENST00000599699 BANF1O75531 89 aa27.43■■□□□ 1.98
SSBP4-206ENST00000599699 PGAM1P18669 254 aa27.43■■□□□ 1.98
SSBP4-206ENST00000599699 PRKAA1Q13131 559 aa27.43■■□□□ 1.98
SSBP4-206ENST00000599699 DNTTIP2Q5QJE6 756 aaKnown RBP27.43■■□□□ 1.98
SSBP4-206ENST00000599699 PRSS42Q7Z5A4 293 aa27.43■■□□□ 1.98
SSBP4-206ENST00000599699 PDIK1LQ8N165 341 aa27.43■■□□□ 1.98
SSBP4-206ENST00000599699 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.43■■□□□ 1.98
SSBP4-206ENST00000599699 OR52E1Q8NGJ3 308 aa27.43■■□□□ 1.98
SSBP4-206ENST00000599699 OR5AR1Q8NGP9 310 aa27.43■■□□□ 1.98
SSBP4-206ENST00000599699 DPH1Q9BZG8 443 aa27.43■■□□□ 1.98
SSBP4-206ENST00000599699 TRIT1Q9H3H1 467 aaKnown RBP27.43■■□□□ 1.98
SSBP4-206ENST00000599699 SMAPO00193 183 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 POLR2CP19387 275 aaPredicted RBP27.42■■□□□ 1.98
SSBP4-206ENST00000599699 AOAHP28039 575 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 ACADLP28330 430 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 ITGA8P53708 1063 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 RAB15P59190 212 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 MRPS25P82663 173 aaKnown RBP27.42■■□□□ 1.98
SSBP4-206ENST00000599699 MC2RQ01718 297 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 C2orf54Q08AI8 447 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 COL28A1Q2UY09 1125 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 MSS51Q4VC12 460 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 DCAF12Q5T6F0 453 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 BROXQ5VW32 411 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 OTOAQ7RTW8 1153 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 PMEPA1Q969W9 287 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 EBNA1BP2Q99848 306 aaKnown RBP27.42■■□□□ 1.98
SSBP4-206ENST00000599699 CTRCQ99895 268 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 ASPSCR1Q9BZE9 553 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 B3GNT4Q9C0J1 378 aa27.42■■□□□ 1.98
SSBP4-206ENST00000599699 ZNF768Q9H5H4 540 aaKnown RBP27.42■■□□□ 1.98
SSBP4-206ENST00000599699 TDRKHQ9Y2W6 561 aaKnown RBP27.42■■□□□ 1.98
SSBP4-206ENST00000599699 H3BMM5 538 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 KPNA5O15131 536 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 CTSL3PQ5NE16 218 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 ANKS6Q68DC2 871 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 HIBCHQ6NVY1 386 aaPredicted RBP27.41■■□□□ 1.98
SSBP4-206ENST00000599699 CENPUQ71F23 418 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 ZFAND4Q86XD8 727 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 VRK3Q8IV63 474 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 TBC1D21Q8IYX1 336 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 SLC22A15Q8IZD6 547 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 BMPERQ8N8U9 685 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 CFAP61Q8NHU2 1237 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 CALML6Q8TD86 181 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 BIRC8Q96P09 236 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 DDA1Q9BW61 102 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 TFB2MQ9H5Q4 396 aaKnown RBP27.41■■□□□ 1.98
SSBP4-206ENST00000599699 XKR8Q9H6D3 395 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 INTS10Q9NVR2 710 aaKnown RBP27.41■■□□□ 1.98
SSBP4-206ENST00000599699 PCDHGA3Q9Y5H0 932 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 B3GALT1Q9Y5Z6 326 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 FAM169AQ9Y6X4 670 aa27.41■■□□□ 1.98
SSBP4-206ENST00000599699 GSAPA4D1B5 854 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 GPC4O75487 556 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 SEC31AO94979 1220 aaKnown RBP27.4■■□□□ 1.98
SSBP4-206ENST00000599699 ESR1P03372 595 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 ARL4DP49703 201 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 TLE3Q04726 772 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 FOXM1Q08050 763 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 ABRQ12979 859 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 CTBP1Q13363 440 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 CRYMQ14894 314 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 HP1BP3Q5SSJ5 553 aaPredicted RBP27.4■■□□□ 1.98
SSBP4-206ENST00000599699 MAATS1Q7Z4T9 603 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 AMIGO1Q86WK6 493 aa27.4■■□□□ 1.98
SSBP4-206ENST00000599699 DENND6AQ8IWF6 608 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms