RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TGM7Q96PF1 710 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 PANX3Q96QZ0 392 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 TCF12Q99081 682 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 FAM167BQ9BTA0 163 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 NAT9Q9BTE0 207 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 TUBB2BQ9BVA1 445 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 NRSN2Q9GZP1 204 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 OR52A5Q9H2C5 316 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 CCDC68Q9H2F9 335 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 GRHL1Q9NZI5 618 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 TDRKHQ9Y2W6 561 aaKnown RBP10.82□□□□□ -0.68
LIG1-211ENST00000596457 HEBP2Q9Y5Z4 205 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 TEX264Q9Y6I9 313 aa10.82□□□□□ -0.68
LIG1-211ENST00000596457 AKAP13Q12802 2813 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 UNC13CQ8NB66 2214 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 CCDC187A0A096LP49 1063 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 IGHV5-10-1A0A0J9YXX1 117 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 SLC5A10A0PJK1 596 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 PMS2P1A4D2B8 440 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 LILRA5A6NI73 299 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 TMX2-CTNND1H3BSU7 103 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 HAUS5O94927 633 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 PKMP14618 531 aaKnown RBP10.81□□□□□ -0.68
LIG1-211ENST00000596457 AOAHP28039 575 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 ABCG1P45844 678 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 LIMK2P53671 638 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 MAPK10P53779 464 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 EPHA4P54764 986 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 GFERP55789 205 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 RPA4Q13156 261 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 TYSND1Q2T9J0 566 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 ZNF658BQ4V348 819 aaPredicted RBP10.81□□□□□ -0.68
LIG1-211ENST00000596457 DNTTIP2Q5QJE6 756 aaKnown RBP10.81□□□□□ -0.68
LIG1-211ENST00000596457 ARMC6Q6NXE6 501 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 IRGCQ6NXR0 463 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 CNSTQ6PJW8 725 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 RAB11FIP2Q7L804 512 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 OTOAQ7RTW8 1153 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 PDZD3Q86UT5 571 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 VRK3Q8IV63 474 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 MMGT1Q8N4V1 131 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 NOA1Q8NC60 698 aaKnown RBP10.81□□□□□ -0.68
LIG1-211ENST00000596457 OR4E2Q8NGC2 313 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 OR4D9Q8NGE8 314 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 WDR36Q8NI36 951 aaKnown RBP10.81□□□□□ -0.68
LIG1-211ENST00000596457 GABPB2Q8TAK5 448 aaPredicted RBP10.81□□□□□ -0.68
LIG1-211ENST00000596457 PYROXD1Q8WU10 500 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 RSC1A1Q92681 617 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 ART4Q93070 314 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 LRRC39Q96DD0 335 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 CERS2Q96G23 380 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 BIRC8Q96P09 236 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 NRTNQ99748 197 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 HGH1Q9BTY7 390 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 UCK1Q9HA47 277 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 INTS10Q9NVR2 710 aaKnown RBP10.81□□□□□ -0.68
LIG1-211ENST00000596457 WDR70Q9NW82 654 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 OGFRQ9NZT2 677 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 AKAP7Q9P0M2 348 aaPredicted RBP10.81□□□□□ -0.68
LIG1-211ENST00000596457 SLC17A6Q9P2U8 582 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 GALPQ9UBC7 116 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 PISDQ9UG56 409 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 FBXO5Q9UKT4 447 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 ASF1AQ9Y294 204 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 VPS9D1Q9Y2B5 631 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 LOXL2Q9Y4K0 774 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 KIF26BQ2KJY2 2108 aa10.81□□□□□ -0.68
LIG1-211ENST00000596457 SMG1Q96Q15 3661 aaKnown RBP10.8□□□□□ -0.68
LIG1-211ENST00000596457 OR6C74A6NCV1 312 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 BHMG1C9JSJ3 638 aaPredicted RBP10.8□□□□□ -0.68
LIG1-211ENST00000596457 TP73O15350 636 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 CAPN5O15484 640 aaPredicted RBP10.8□□□□□ -0.68
LIG1-211ENST00000596457 BRINP1O60477 761 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 RASSF9O75901 435 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 ESR1P03372 595 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 JMJD7P0C870 316 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 POLR2CP19387 275 aaPredicted RBP10.8□□□□□ -0.68
LIG1-211ENST00000596457 ITIH1P19827 911 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 NDUFS1P28331 727 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 RBMS1P29558 406 aaKnown RBP10.8□□□□□ -0.68
LIG1-211ENST00000596457 CCKBRP32239 447 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 LEPRP48357 1165 aaKnown RBP10.8□□□□□ -0.68
LIG1-211ENST00000596457 CD151P48509 253 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 SEPHS1P49903 392 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 PLOD1Q02809 727 aaPredicted RBP10.8□□□□□ -0.68
LIG1-211ENST00000596457 CAV1Q03135 178 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 ZFP36L1Q07352 338 aaKnown RBP10.8□□□□□ -0.68
LIG1-211ENST00000596457 C16orf72Q14CZ0 275 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 RTP5Q14D33 572 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 TRMT10BQ6PF06 316 aaKnown RBP10.8□□□□□ -0.68
LIG1-211ENST00000596457 FAM92BQ6ZTR7 304 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 PLXDC1Q8IUK5 500 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 SPNS2Q8IVW8 549 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 SLITRK4Q8IW52 837 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 LMNTD2Q8IXW0 634 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 CEP112Q8N8E3 955 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 OR5AR1Q8NGP9 310 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 FBXO25Q8TCJ0 367 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 ASZ1Q8WWH4 475 aa10.8□□□□□ -0.68
LIG1-211ENST00000596457 LCN9Q8WX39 176 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms