RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 OR6C74A6NCV1 312 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 IFRD1O00458 451 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 TOX3O15405 576 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 TTI1O43156 1089 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 GPC4O75487 556 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 TPBGLP0DKB5 382 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 RPS3P23396 243 aaKnown RBP eCLIP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 NDUFS1P28331 727 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 SEPHS1P49903 392 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 CSE1LP55060 971 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 ETF1P62495 437 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 SH3BP2P78314 561 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 DR1Q01658 176 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 SRSF6Q13247 344 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 DHX34Q14147 1143 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 IZUMO3Q5VZ72 239 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 CENPUQ71F23 418 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 HOOK3Q86VS8 718 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 DTX1Q86Y01 620 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 CILP2Q8IUL8 1156 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 SLC22A15Q8IZD6 547 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 ACVR1CQ8NER5 493 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 OR52E1Q8NGJ3 308 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 OR5AR1Q8NGP9 310 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 KLHL6Q8WZ60 621 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 TFGQ92734 400 aaPredicted RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 PPM1MQ96MI6 270 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 FERD3LQ96RJ6 166 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 TTC1Q99614 292 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 MAP3K3Q99759 626 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 CTRCQ99895 268 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 WDR83Q9BRX9 315 aaKnown RBP10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 HGH1Q9BTY7 390 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 DDA1Q9BW61 102 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 CARD6Q9BX69 1037 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 DPH1Q9BZG8 443 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 SPRY4Q9C004 299 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 PRORYQ9H606 182 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 PLAC1Q9HBJ0 212 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 FBXO8Q9NRD0 319 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 SLC39A1Q9NY26 324 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 SAMD15Q9P1V8 674 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 ANAPC5Q9UJX4 755 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 HEBP2Q9Y5Z4 205 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 RPS6KL1Q9Y6S9 549 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 COLEC10Q9Y6Z7 277 aa10.69□□□□□ -0.7
SHKBP1-206ENST00000595523 CCDC88CQ9P219 2028 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 MAGEB16A2A368 324 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 CCDC188H7C350 402 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 BTN3A3O00478 584 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 BTN3A1O00481 513 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 EFSO43281 561 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 RASSF9O75901 435 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 USP1O94782 785 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 LIPCP11150 499 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 OGNP20774 298 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 AOAHP28039 575 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 PPARGP37231 505 aaPredicted RBP10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 KPNA2P52292 529 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 EIF3BP55884 814 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 PRKG2Q13237 762 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 SYTL3Q4VX76 610 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 CACHD1Q5VU97 1274 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 MRNIPQ6NTE8 343 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 NEPROQ6NW34 567 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 KLHL35Q6PF15 583 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 SYT10Q6XYQ8 523 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 SYDE1Q6ZW31 735 aaPredicted RBP10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 OOSP2Q86WS3 158 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 LRRC6Q86X45 466 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 IGDCC3Q8IVU1 814 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 SPNS2Q8IVW8 549 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 DENND6AQ8IWF6 608 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 UNC5BQ8IZJ1 945 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 OTUD6BQ8N6M0 293 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 OR4E2Q8NGC2 313 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 ZDHHC12Q96GR4 267 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 SLC41A2Q96JW4 573 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 PWWP2AQ96N64 755 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 TWSG1Q9GZX9 223 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 TFB2MQ9H5Q4 396 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 XKR8Q9H6D3 395 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 MVB12BQ9H7P6 319 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 CPNE5Q9HCH3 593 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 HRASLS2Q9NWW9 162 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 RNF14Q9UBS8 474 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 GNPTGQ9UJJ9 305 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 POMT2Q9UKY4 750 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 ICKQ9UPZ9 632 aa10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 MDC1Q14676 2089 aaKnown RBP10.68□□□□□ -0.7
SHKBP1-206ENST00000595523 UBA6A0AVT1 1052 aaPredicted RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 TLCD2A6NGC4 264 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 NIPSNAP2O75323 286 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 NDUFS3O75489 264 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 SLCO2B1O94956 709 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 SEC31AO94979 1220 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 S1PR4O95977 384 aa10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 NELFEP18615 380 aaKnown RBP10.67□□□□□ -0.7
SHKBP1-206ENST00000595523 PAMP19021 973 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms