RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NKX2-8O15522 239 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 OR56A5P0C7T3 313 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 FAM87AP0C7U9 286 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 PRAMEP78395 509 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 CRADDP78560 199 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 HSD11B2P80365 405 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 ACY1Q03154 408 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 PRKAA1Q13131 559 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 PRKG2Q13237 762 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 FASTKD1Q53R41 847 aaKnown RBP13.49□□□□□ -0.25
APOC1-208ENST00000592535 PCID2Q5JVF3 399 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 LYPLAL1Q5VWZ2 237 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 CYB5D1Q6P9G0 228 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 C4orf22Q6V702 233 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 NLRP9Q7RTR0 991 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 LDB1Q86U70 411 aaPredicted RBP13.49□□□□□ -0.25
APOC1-208ENST00000592535 D2HGDHQ8N465 521 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 PEX13Q92968 403 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 STAMBPL1Q96FJ0 436 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 HGH1Q9BTY7 390 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 TFB2MQ9H5Q4 396 aaKnown RBP13.49□□□□□ -0.25
APOC1-208ENST00000592535 XKR8Q9H6D3 395 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 MVB12BQ9H7P6 319 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 CHRAC1Q9NRG0 131 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 FGF21Q9NSA1 209 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 RARRES3Q9UL19 164 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 MRPS18BQ9Y676 258 aaKnown RBP13.49□□□□□ -0.25
APOC1-208ENST00000592535 RPS6KL1Q9Y6S9 549 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 BAHCC1Q9P281 2608 aa13.49□□□□□ -0.25
APOC1-208ENST00000592535 SPTBP11277 2137 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 TCRBV7S3A2A0A539 114 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 SLC5A10A0PJK1 596 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 GSAPA4D1B5 854 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 BTN3A1O00481 513 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 ZBTB11O95625 1053 aaPredicted RBP13.48□□□□□ -0.25
APOC1-208ENST00000592535 PRKAR1AP10644 381 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 ITGB6P18564 788 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 CDH3P22223 829 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 F8A1P23610 371 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 ACADLP28330 430 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 DLSTP36957 453 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 TRIP13Q15645 432 aaPredicted RBP13.48□□□□□ -0.25
APOC1-208ENST00000592535 GPR19Q15760 415 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 SYTL3Q4VX76 610 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 PWWP2BQ6NUJ5 590 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 OR5AR1Q8NGP9 310 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 LKAAEAR1Q8TD35 194 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 STARD8Q92502 1023 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 SGSM3Q96HU1 749 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 TTC1Q99614 292 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 EFHD1Q9BUP0 239 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 HOMER3Q9NSC5 361 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 TREX1Q9NSU2 369 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 SOHLH2Q9NX45 425 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 MARCH4Q9P2E8 410 aaPredicted RBP13.48□□□□□ -0.25
APOC1-208ENST00000592535 CROTQ9UKG9 612 aa13.48□□□□□ -0.25
APOC1-208ENST00000592535 TTC7AQ9ULT0 858 aaPredicted RBP13.48□□□□□ -0.25
APOC1-208ENST00000592535 SNRNP200O75643 2136 aaKnown RBP13.48□□□□□ -0.25
APOC1-208ENST00000592535 SLC9B1P1A6NJY1 282 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 BHMG1C9JSJ3 638 aaPredicted RBP13.47□□□□□ -0.25
APOC1-208ENST00000592535 MATN2O00339 956 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 TERTO14746 1132 aaKnown RBP13.47□□□□□ -0.25
APOC1-208ENST00000592535 MGAT1P26572 445 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 NMBRP28336 390 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 OAS2P29728 719 aaKnown RBP13.47□□□□□ -0.25
APOC1-208ENST00000592535 NPY2RP49146 381 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 VPS41P49754 854 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 TERF1P54274 439 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 CSE1LP55060 971 aaKnown RBP13.47□□□□□ -0.25
APOC1-208ENST00000592535 CDC20Q12834 499 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 ATP1A1-AS1Q5TC04 95 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 BORAQ6PGQ7 559 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 ZNF605Q86T29 641 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 AMIGO1Q86WK6 493 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 ADGRF3Q8IZF5 1079 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 CARFQ8N187 725 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 RASGEF1CQ8N431 466 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 MS4A14Q96JA4 679 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 FCRL4Q96PJ5 515 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 IL22Q9GZX6 179 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 C1GALT1Q9NS00 363 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 CATSPERZQ9NTU4 200 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 SYBUQ9NX95 663 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 BFARQ9NZS9 450 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 ICKQ9UPZ9 632 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 ASF1AQ9Y294 204 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 BTRCQ9Y297 605 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
APOC1-208ENST00000592535 PIEZO2Q9H5I5 2752 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 IQCF5A8MTL0 148 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 B8ZZF3 427 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 CD3EAPO15446 510 aaKnown RBP13.46□□□□□ -0.25
APOC1-208ENST00000592535 MT-ND3P03897 115 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 NTRK1P04629 796 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 TPBGLP0DKB5 382 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 ST6GAL1P15907 406 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 TPSB2P20231 275 aa13.46□□□□□ -0.25
APOC1-208ENST00000592535 PRDX3P30048 256 aaKnown RBP13.46□□□□□ -0.25
APOC1-208ENST00000592535 CCR7P32248 378 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms