RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 TMEM126BQ8IUX1 230 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 TAB3Q8N5C8 712 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-205ENST00000587774 CLDN19Q8N6F1 224 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 SLC35B2Q8TB61 432 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 NRTNQ99748 197 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 DESI2Q9BSY9 194 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 TMEM121Q9BTD3 319 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 VPS37BQ9H9H4 285 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 RP1L1Q8IWN7 2480 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-205ENST00000587774 USP9XQ93008 2570 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-205ENST00000587774 GSAPA4D1B5 854 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 K7EM74 188 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 CDH3P22223 829 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 PDHA2P29803 388 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 PREPP48147 710 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 PMS2P54278 862 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 GPS2Q13227 327 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 COLEC12Q5KU26 742 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 TMTC4Q5T4D3 741 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 PIANPQ8IYJ0 282 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 SYCE1Q8N0S2 351 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 LCN9Q8WX39 176 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 FERD3LQ96RJ6 166 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 SRMSQ9H3Y6 488 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 MAN2B2Q9Y2E5 1009 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 CAPN6Q9Y6Q1 641 aa18.25■□□□□ 0.51
TRIM47-205ENST00000587774 CCDC78A2IDD5 438 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 SLC9B1P1A6NJY1 282 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 MKRN2OSH3BPM6 223 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 MATN2O00339 956 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 IFRD1O00458 451 aaPredicted RBP18.24■□□□□ 0.51
TRIM47-205ENST00000587774 BTN3A1O00481 513 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 ARHGAP6O43182 974 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 RFPL1O75677 317 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 AP2A1O95782 977 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 RECKO95980 971 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 CACNG1Q06432 222 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 KIF5AQ12840 1032 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 ABRQ12979 859 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 IL10RAQ13651 578 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 LAMB3Q13751 1172 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 DBN1Q16643 649 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 TAS2R42Q7RTR8 314 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 SLC38A9Q8NBW4 561 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 OR52E1Q8NGJ3 308 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 OR8K5Q8NH50 307 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 STYXQ8WUJ0 223 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 CDKN2AIPNLQ96HQ2 116 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 HGH1Q9BTY7 390 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 GPR87Q9BY21 358 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 LATS2Q9NRM7 1088 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 C1GALT1Q9NS00 363 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 KCND1Q9NSA2 647 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 MDC1Q14676 2089 aaKnown RBP18.24■□□□□ 0.51
TRIM47-205ENST00000587774 HEATR5BQ9P2D3 2071 aa18.24■□□□□ 0.51
TRIM47-205ENST00000587774 BTN3A3O00478 584 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 DNAJB5O75953 348 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 ST6GAL1P15907 406 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 PTPN4P29074 926 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 CD151P48509 253 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 RPA4Q13156 261 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 PRAMEF17Q5VTA0 474 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 ZNF517Q6ZMY9 492 aaPredicted RBP18.23■□□□□ 0.51
TRIM47-205ENST00000587774 ATG4AQ8WYN0 398 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 MR1Q95460 341 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 HES6Q96HZ4 224 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 TRIM55Q9BYV6 548 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 PITPNM3Q9BZ71 974 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 FANCEQ9HB96 536 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 TLK1Q9UKI8 766 aa18.23■□□□□ 0.51
TRIM47-205ENST00000587774 MROH6A6NGR9 719 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 OR51F1A6NGY5 319 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 MSNP26038 577 aaKnown RBP18.22■□□□□ 0.51
TRIM47-205ENST00000587774 PRDX3P30048 256 aaKnown RBP18.22■□□□□ 0.51
TRIM47-205ENST00000587774 RPS15P62841 145 aaKnown RBP18.22■□□□□ 0.51
TRIM47-205ENST00000587774 FOXK1P85037 733 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 KLRB1Q12918 225 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 BOP1Q14137 746 aaKnown RBP18.22■□□□□ 0.51
TRIM47-205ENST00000587774 UGT8Q16880 541 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 CCDC38Q502W7 563 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 ZNF789Q5FWF6 425 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 CPZQ66K79 652 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 TCTN3Q6NUS6 607 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 SYVN1Q86TM6 617 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 GAS2L3Q86XJ1 694 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 APLFQ8IW19 511 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-205ENST00000587774 PHC3Q8NDX5 983 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 SEC14L1Q92503 715 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 CHST8Q9H2A9 424 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 TFB2MQ9H5Q4 396 aaKnown RBP18.22■□□□□ 0.51
TRIM47-205ENST00000587774 MVB12BQ9H7P6 319 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 SMARCAL1Q9NZC9 954 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 PRSS21Q9Y6M0 314 aa18.22■□□□□ 0.51
TRIM47-205ENST00000587774 TMEM150CB9EJG8 249 aa18.21■□□□□ 0.51
TRIM47-205ENST00000587774 AP2A2O94973 939 aa18.21■□□□□ 0.51
TRIM47-205ENST00000587774 GSTM1P09488 218 aa18.21■□□□□ 0.51
TRIM47-205ENST00000587774 PVRP15151 417 aa18.21■□□□□ 0.51
TRIM47-205ENST00000587774 PSMA3P25788 255 aa18.21■□□□□ 0.51
TRIM47-205ENST00000587774 FOXN2P32314 431 aa18.21■□□□□ 0.51
TRIM47-205ENST00000587774 LMAN1P49257 510 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms