RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 P2RY12Q9H244 342 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 MVB12BQ9H7P6 319 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 C20orf96Q9NUD7 363 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 HRASLS2Q9NWW9 162 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 OCIAD1Q9NX40 245 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 SLC39A1Q9NY26 324 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 ASF1AQ9Y294 204 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 PCDHGA7Q9Y5G6 932 aa12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 URB1O60287 2271 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-218ENST00000582955 ANKRD11Q6UB99 2663 aaPredicted RBP12.27□□□□□ -0.44
SMARCE1-218ENST00000582955 ZCWPW2A0A1B0GU75 182 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 OR6C74A6NCV1 312 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 OR5K3A6NET4 321 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 NVLO15381 856 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 KIF1CO43896 1103 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 ANKRD34CP0C6C1 535 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 PGAM1P18669 254 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 RPS3P23396 243 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 ITPKBP27987 946 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 FMO4P31512 558 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 ABCG1P45844 678 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 ITGA8P53708 1063 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 PPP1CAP62136 330 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 LONRF1Q17RB8 773 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 DNTTIP2Q5QJE6 756 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 CACHD1Q5VU97 1274 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 CILP2Q8IUL8 1156 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 PDIK1LQ8N165 341 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 OR4E2Q8NGC2 313 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 OR52E1Q8NGJ3 308 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 GSDMBQ8TAX9 411 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 ASZ1Q8WWH4 475 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 LCN9Q8WX39 176 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 LPGAT1Q92604 370 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 TAAR9Q96RI9 348 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 RAB33BQ9H082 229 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 TRIT1Q9H3H1 467 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 SRMSQ9H3Y6 488 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 FOXJ2Q9P0K8 574 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 EPHA6Q9UF33 1036 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 CRYL1Q9Y2S2 319 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 CACNA1BQ00975 2339 aa12.27□□□□□ -0.45
SMARCE1-218ENST00000582955 FAM187AA6NFU0 413 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 B4E171 279 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 C9orf172C9J069 976 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 BHMG1C9JSJ3 638 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 SMAPO00193 183 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 TOX3O15405 576 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 KLK10O43240 276 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 NIPSNAP2O75323 286 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 KRT37O76014 449 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 SEC31AO94979 1220 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 POLR2CP19387 275 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 AOAHP28039 575 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 ACADLP28330 430 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 TSPAN7P41732 249 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 RAB15P59190 212 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 PRKAA1Q13131 559 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 CTBP1Q13363 440 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 CRYMQ14894 314 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 HIF1AQ16665 826 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 COL28A1Q2UY09 1125 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 MSS51Q4VC12 460 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 CTSL3PQ5NE16 218 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 HP1BP3Q5SSJ5 553 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 DCAF12Q5T6F0 453 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 BROXQ5VW32 411 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 ANKS6Q68DC2 871 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 HIBCHQ6NVY1 386 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 CENPUQ71F23 418 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 OTOAQ7RTW8 1153 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 MAATS1Q7Z4T9 603 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 PRSS42Q7Z5A4 293 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 KCNMB4Q86W47 210 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 VRK3Q8IV63 474 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 DENND6AQ8IWF6 608 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 SPACA3Q8IXA5 215 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 SLC22A15Q8IZD6 547 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 OR5AR1Q8NGP9 310 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 CFAP61Q8NHU2 1237 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 CALML6Q8TD86 181 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 ZNF592Q92610 1267 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 PMEPA1Q969W9 287 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 FAM136AQ96C01 138 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 TRIM44Q96DX7 344 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 PWWP2AQ96N64 755 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 EBNA1BP2Q99848 306 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 CTRCQ99895 268 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 DPH5Q9H2P9 285 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 ZNF768Q9H5H4 540 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 FBXO6Q9NRD1 293 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 INTS10Q9NVR2 710 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 TDRKHQ9Y2W6 561 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 SNX24Q9Y343 169 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 FAM169AQ9Y6X4 670 aa12.26□□□□□ -0.45
SMARCE1-218ENST00000582955 ZZEF1O43149 2961 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 GSAPA4D1B5 854 aa12.25□□□□□ -0.45
SMARCE1-218ENST00000582955 E5RI56 91 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms