RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NLGN3Q9NZ94 848 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 NCKIPSDQ9NZQ3 722 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 PNMA8BQ9ULN7 279 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 CORO1CQ9ULV4 474 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 GPR34Q9UPC5 381 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 DNMT3AQ9Y6K1 912 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 ARID1BQ8NFD5 2236 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 KCNJ13O60928 360 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 NDUFS3O75489 264 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 GSTM1P09488 218 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 ATP1B2P14415 290 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 ZNF7P17097 686 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 ARNTP27540 789 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 ALDH3A1P30838 453 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 RPA3P35244 121 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 ARCN1P48444 511 aaKnown RBP13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 CD151P48509 253 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 GSTM4Q03013 218 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 BNIP3Q12983 259 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 SMAD1Q15797 465 aaKnown RBP13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 CCDC153Q494R4 210 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 BCL7AQ4VC05 210 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 CCDC157Q569K6 752 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 HSP90AA5PQ58FG0 334 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 ZNF648Q5T619 568 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 MROH9Q5TGP6 573 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 KANSL1Q7Z3B3 1105 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 TAF8Q7Z7C8 310 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 GATAD2AQ86YP4 633 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 RASGEF1AQ8N9B8 481 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 GPBAR1Q8TDU6 330 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 DENND1AQ8TEH3 1009 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 GLMNQ92990 594 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 ISL2Q96A47 359 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 FCRL3Q96P31 734 aaPredicted RBP13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 TSSK1BQ9BXA7 367 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 CLPBQ9H078 707 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 TMEM168Q9H0V1 697 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 PLAC1Q9HBJ0 212 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 SMYD2Q9NRG4 433 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 PCMTD2Q9NV79 361 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 TLK1Q9UKI8 766 aa13.24□□□□□ -0.29
CSNK1D-220ENST00000581737 COL5A1P20908 1838 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 TCP11X1B4DZS4 312 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 GOLGA8RI6L899 631 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 BIRC5O15392 142 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 FTH1P02794 183 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 FUCA1P04066 466 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 TROVE2P10155 538 aaKnown RBP eCLIP13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 ACP5P13686 325 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 CREB1P16220 341 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 PRLHRP49683 370 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 CDKN1CP49918 316 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 SEC24CP53992 1094 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 CTBSQ01459 385 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 ASPHQ12797 758 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 C1orf61Q13536 156 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 BMPR2Q13873 1038 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 TYSND1Q2T9J0 566 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 ZNF470Q6ECI4 717 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 ZCCHC8Q6NZY4 707 aaKnown RBP13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 DHRS13Q6UX07 377 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 CHST15Q7LFX5 561 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 SLC25A45Q8N413 288 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 OR4C6Q8NH72 309 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 VPS39Q96JC1 886 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 ZNF317Q96PQ6 595 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 CDC6Q99741 560 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 TRIM56Q9BRZ2 755 aaKnown RBP13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 INTS10Q9NVR2 710 aaKnown RBP13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 UCKL1Q9NWZ5 548 aa13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 MARCH4Q9P2E8 410 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-220ENST00000581737 ARHGEF17Q96PE2 2063 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 ATMQ13315 3056 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 ACACAQ13085 2346 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 OR2AG2A6NM03 316 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 H3BMM5 538 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 PRMT5O14744 637 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 FFAR2O15552 330 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 TLX3O43711 291 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 H2AFYO75367 372 aaKnown RBP13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 RFPL1O75677 317 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 OR56A5P0C7T3 313 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 PRSS56P0CW18 603 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 COL6A2P12110 1019 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 SLC2A4P14672 509 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 DRD4P21917 467 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 CRABP2P29373 138 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 CA5AP35218 305 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 ACTR1BP42025 376 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 RPIAP49247 311 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 CLCNKAP51800 687 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 CTSCP53634 463 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 ACTR1AP61163 376 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 B4GALNT1Q00973 533 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 TSNAXIP1Q2TAA8 658 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 TMEM220Q6QAJ8 160 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 DET1Q7L5Y6 550 aa13.22□□□□□ -0.29
CSNK1D-220ENST00000581737 AMZ2Q86W34 360 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms