RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	SLC5A10	A0PJK1	596 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	OR5K3	A6NET4	321 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PYCARD-AS1	I3L0S3	204 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	AGRP	O00253	132 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PRMT5	O14744	637 aa	Predicted RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	LIPC	P11150	499 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PAM	P19021	973 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PDHA2	P29803	388 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	LEPR	P48357	1165 aa	Known RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PTK6	Q13882	451 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	KRT33B	Q14525	404 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	DCAF12	Q5T6F0	453 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	MRNIP	Q6NTE8	343 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	DUS1L	Q6P1R4	473 aa	Known RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PRICKLE2	Q7Z3G6	844 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PCGF5	Q86SE9	256 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	LRRC6	Q86X45	466 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	DTX1	Q86Y01	620 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	CARF	Q8N187	725 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	KLHL6	Q8WZ60	621 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	ELMO1	Q92556	727 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	TFG	Q92734	400 aa	Predicted RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	ART4	Q93070	314 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	TCF12	Q99081	682 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	FAM117A	Q9C073	453 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	DDX47	Q9H0S4	455 aa	Known RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	TFB2M	Q9H5Q4	396 aa	Known RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	SAMD15	Q9P1V8	674 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	KLHL3	Q9UH77	587 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	IL17B	Q9UHF5	180 aa		13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
CSNK1D-208	ENST00000578501	STMND1	H3BQB6	276 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PFDN6	O15212	129 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	VAPB	O95292	243 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	RPS3	P23396	243 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	ACADL	P28330	430 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PAFAH1B1	P43034	410 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PTGIR	P43119	386 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	PREP	P48147	710 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	ARCN1	P48444	511 aa	Known RBP	13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	TERF1	P54274	439 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	ADAR	P55265	1226 aa	Known RBP	13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	BOP1	Q14137	746 aa	Known RBP	13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	TYSND1	Q2T9J0	566 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	RNF187	Q5TA31	235 aa	Predicted RBP	13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	CACHD1	Q5VU97	1274 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	IRGC	Q6NXR0	463 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	CASC4	Q6P4E1	433 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	CEACAM20	Q6UY09	585 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	TMEM135	Q86UB9	458 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	HOOK3	Q86VS8	718 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	OOSP2	Q86WS3	158 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	ASZ1	Q8WWH4	475 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	UBXN4	Q92575	508 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	CAPZA3	Q96KX2	299 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	FERD3L	Q96RJ6	166 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	P2RY12	Q9H244	342 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	HRASLS2	Q9NWW9	162 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	SIDT1	Q9NXL6	827 aa	Known RBP	13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	GNPTG	Q9UJJ9	305 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	B3GALT1	Q9Y5Z6	326 aa		13.28	□□□□□ -0.28
CSNK1D-208	ENST00000578501	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	GOLGA8M	H3BSY2	632 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CCDC188	H7C350	402 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	MATN2	O00339	956 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	KPNA5	O15131	536 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	FANCG	O15287	622 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	GPC4	O75487	556 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	NDUFS3	O75489	264 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	RASSF9	O75901	435 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	USP1	O94782	785 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SLCO2B1	O94956	709 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	NELFE	P18615	380 aa	Known RBP	13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	OGN	P20774	298 aa	Known RBP	13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	AOAH	P28039	575 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CCR7	P32248	378 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	IL11RA	Q14626	422 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ANKRD20A4	Q4UJ75	823 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SYTL3	Q4VX76	610 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CYB5D1	Q6P9G0	228 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CES3	Q6UWW8	571 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	FAM92B	Q6ZTR7	304 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	LDB1	Q86U70	411 aa	Predicted RBP	13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ZFAND4	Q86XD8	727 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	KMT5C	Q86Y97	462 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SLC22A15	Q8IZD6	547 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	LCN9	Q8WX39	176 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SLC41A2	Q96JW4	573 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	PANX3	Q96QZ0	392 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	CCNL2	Q96S94	520 aa	Predicted RBP	13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	SPRY4	Q9C004	299 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	ASIC3	Q9UHC3	531 aa		13.27	□□□□□ -0.29
CSNK1D-208	ENST00000578501	POLG2	Q9UHN1	485 aa		13.27	□□□□□ -0.29

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