RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NLNQ9BYT8 704 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 ATP13A3Q9H7F0 1226 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 SNTG1Q9NSN8 517 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 C1orf109Q9NX04 203 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 GTF2IRD1Q9UHL9 959 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 KRT87PA6NCN2 255 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 BHMG1C9JSJ3 638 aaPredicted RBP17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 NKX2-5P52952 324 aaPredicted RBP17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 FOXA1P55317 472 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 ZNF280AP59817 542 aaPredicted RBP17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 ELAVL2Q12926 359 aaKnown RBP17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 MOGQ16653 247 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 DEPDC4Q8N2C3 294 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 XAGE5Q8WWM1 108 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 MYO19Q96H55 970 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 DIRAS2Q96HU8 199 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 SGK2Q9HBY8 427 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 MTMR10Q9NXD2 777 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 CRNNQ9UBG3 495 aaPredicted RBP17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 COL1A2P08123 1366 aa17.59■□□□□ 0.41
ATPAF1-214ENST00000576409 BRWD1Q9NSI6 2320 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 PER2O15055 1255 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 ALDH1A2O94788 518 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 ANXA4P09525 319 aaPredicted RBP17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 VARSP26640 1264 aaKnown RBP17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 OXTRP30559 389 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 CYP27C1Q4G0S4 372 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 FOXB2Q5VYV0 432 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 MSANTD2Q6P1R3 559 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 RD3Q7Z3Z2 195 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 PCSK9Q8NBP7 692 aaKnown RBP17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 PSD4Q8NDX1 1056 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 OR52B6Q8NGF0 335 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 HAPLN3Q96S86 360 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 NAA50Q9GZZ1 169 aaKnown RBP17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 NKIRAS2Q9NYR9 191 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 KCNE2Q9Y6J6 123 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 A0A0D9SEW6 157 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 HMX2A2RU54 273 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 H0YC42 278 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 FBP2O00757 339 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 FCGRTP55899 365 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 SMARCB1Q12824 385 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 SLC13A2Q13183 592 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 PCBP1Q15365 356 aaKnown RBP eCLIP17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 USP39Q53GS9 565 aaKnown RBP17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 KRT74Q7RTS7 529 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 MRGPRX2Q96LB1 330 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 C11orf16Q9NQ32 467 aa17.58■□□□□ 0.41
ATPAF1-214ENST00000576409 SH3PXD2BA1X283 911 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 GABRDO14764 452 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 KERAO60938 352 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 NR2F1P10589 423 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 PTSQ03393 145 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 IL10RBQ08334 325 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 ELP6Q0PNE2 266 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 PDCD4Q53EL6 469 aaKnown RBP17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 VARS2Q5ST30 1063 aaKnown RBP17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 PLET1Q6UQ28 207 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 ZNF534Q76KX8 674 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 ZNF467Q7Z7K2 595 aaPredicted RBP17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 CDH24Q86UP0 819 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 IRGQQ8WZA9 623 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 BCAP31P51572 246 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 COX10Q12887 443 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 SETMARQ53H47 684 aaPredicted RBP17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 CACTIN-AS1Q8N1I8 211 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 ZBTB2Q8N680 514 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 RTP4Q96DX8 246 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 R3HDMLQ9H3Y0 253 aa17.58■□□□□ 0.4
ATPAF1-214ENST00000576409 LOC730098B7Z3J9 87 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 TPD52L2O43399 206 aaKnown RBP17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 PCDH8O95206 1070 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 GBAP04062 536 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 PGRP06401 933 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 BUD31P41223 144 aaPredicted RBP17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 ALDH3A2P51648 485 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 ILF2Q12905 390 aaKnown RBP17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 ZNF773Q6PK81 442 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 SLC15A4Q8N697 577 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 PACRGLQ8N7B6 248 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 VPS51Q9UID3 782 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 AP3M1Q9Y2T2 418 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 PCDHB3Q9Y5E6 796 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 PLOD2O00469 737 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 CYP11A1P05108 521 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 SCNN1AP37088 669 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 QPRTQ15274 297 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 ANKRD26P1Q6NSI1 321 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 ARMCX6Q7L4S7 300 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 LRCH3Q96II8 777 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 YIPF2Q9BWQ6 316 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 MUC13Q9H3R2 512 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 C8orf4Q9NR00 106 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 ZNF221Q9UK13 617 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 SSR3Q9UNL2 185 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 KCNH4Q9UQ05 1017 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 FAM240BA0A1B0GVZ2 78 aa17.57■□□□□ 0.4
ATPAF1-214ENST00000576409 PIRO00625 290 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms