RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 ADAMTSL2Q86TH1 951 aa16.92■□□□□ 0.3
TOM1L1-221ENST00000575882 MSRB3Q8IXL7 192 aa16.92■□□□□ 0.3
TOM1L1-221ENST00000575882 NSUN3Q9H649 340 aaKnown RBP16.92■□□□□ 0.3
TOM1L1-221ENST00000575882 EXD2Q9NVH0 621 aa16.92■□□□□ 0.3
TOM1L1-221ENST00000575882 SLC25A37Q9NYZ2 338 aa16.92■□□□□ 0.3
TOM1L1-221ENST00000575882 PAIP2BQ9ULR5 123 aaKnown RBP16.92■□□□□ 0.3
TOM1L1-221ENST00000575882 EIF3LQ9Y262 564 aaKnown RBP16.92■□□□□ 0.3
TOM1L1-221ENST00000575882 GREB1Q4ZG55 1949 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 LOC100130705A0A1B0GUX0 176 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 PTGES3LE9PB15 166 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 SLC1A7O00341 560 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 FFAR3O14843 346 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 INPPL1O15357 1258 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 GPR42O15529 346 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 FFAR2O15552 330 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 GUCA1CO95843 209 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 IGHA2P01877 340 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 MSH3P20585 1137 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 TMEM179BQ7Z7N9 219 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 NCLNQ969V3 563 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 ADGRE3Q9BY15 652 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 CRISPLD1Q9H336 500 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 TRNAU1APQ9NX07 287 aaKnown RBP16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 ENPP5Q9UJA9 477 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 DHRS7Q9Y394 339 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 CBX4O00257 560 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 ACSL4O60488 711 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 E2F6O75461 281 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 INMTO95050 263 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 RPLP2P05387 115 aaKnown RBP16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 CDH3P22223 829 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 IDUAP35475 653 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 ISL1P61371 349 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 GSTM4Q03013 218 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 TOP3AQ13472 1001 aaPredicted RBP16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 C5orf22Q49AR2 442 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 CLLU1OSQ5K130 101 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 SPANXN4Q5MJ08 99 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 PIWIL3Q7Z3Z3 882 aaKnown RBP16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 ABI1Q8IZP0 508 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 TTC30BQ8N4P2 665 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 FRS2Q8WU20 508 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 RHBDF1Q96CC6 855 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 NODALQ96S42 347 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 NEURL2Q9BR09 285 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 DPY30Q9C005 99 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 CCDC90BQ9GZT6 254 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 P2RY12Q9H244 342 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 ZFP14Q9HCL3 533 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 PAK1IP1Q9NWT1 392 aaPredicted RBP16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 C3orf18Q9UK00 162 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 INVSQ9Y283 1065 aa16.91■□□□□ 0.3
TOM1L1-221ENST00000575882 H3BNC9 293 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 TMEM189-UBE2V1I3L0A0 370 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 RAD51BO15315 384 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 SCELO95171 688 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 CDH4P55283 916 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 HMGCS1Q01581 520 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 CYP2A13Q16696 494 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 GTDC1Q4AE62 458 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 FKBP9P1Q75LS8 142 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 ADHFE1Q8IWW8 467 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 EID3Q8N140 333 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 PDLIM5Q96HC4 596 aaKnown RBP16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 SH3YL1Q96HL8 342 aaPredicted RBP16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 ZNF347Q96SE7 839 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 FARSBQ9NSD9 589 aaKnown RBP16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 ELOVL2Q9NXB9 296 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 RGS14O43566 566 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 F11P03951 625 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 ITIH1P19827 911 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 DCTP40126 519 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 KPNA1P52294 538 aaPredicted RBP16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 GP2P55259 537 aaKnown RBP16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 PON2Q15165 354 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 ZNF691Q5VV52 312 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 GCNT7Q6ZNI0 430 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 BTLAQ7Z6A9 289 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 MICU2Q8IYU8 434 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 PHACTR4Q8IZ21 702 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 LIX1Q8N485 282 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 KRTCAP2Q8N6L1 136 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 OR5K1Q8NHB7 308 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 CCDC97Q96F63 343 aaPredicted RBP16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 U3KQV3 271 aa16.9■□□□□ 0.3
TOM1L1-221ENST00000575882 PGRP06401 933 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 ITGB6P18564 788 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 PCMT1P22061 227 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 GGT5P36269 586 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 RAD23AP54725 363 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 OCA2Q04671 838 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 TAF1CQ15572 869 aaPredicted RBP16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 CTF1Q16619 201 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 FAM171A1Q5VUB5 890 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 STK40Q8N2I9 435 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 PARP8Q8N3A8 854 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 SH3GL1Q99961 368 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 ANGPTL3Q9Y5C1 460 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 CHD5Q8TDI0 1954 aa16.89■□□□□ 0.29
TOM1L1-221ENST00000575882 TMEM221A6NGB7 291 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms