RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 SMARCAL1Q9NZC9 954 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 PAK5Q9P286 719 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 CROTQ9UKG9 612 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 TCAF1Q9Y4C2 921 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 HEBP2Q9Y5Z4 205 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 COLEC10Q9Y6Z7 277 aa16.94■□□□□ 0.3
SMG6-214ENST00000573827 GOT2P00505 430 aaKnown RBP16.93■□□□□ 0.3
SMG6-214ENST00000573827 FGGP02679 453 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 POLR2CP19387 275 aaPredicted RBP16.93■□□□□ 0.3
SMG6-214ENST00000573827 HSD11B2P80365 405 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 ZNF789Q5FWF6 425 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 BORAQ6PGQ7 559 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 ADGRF3Q8IZF5 1079 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 DNAAF3Q8N9W5 541 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 SIDT2Q8NBJ9 832 aaKnown RBP16.93■□□□□ 0.3
SMG6-214ENST00000573827 OR52E1Q8NGJ3 308 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 PEX13Q92968 403 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 KIAA1143Q96AT1 154 aaPredicted RBP16.93■□□□□ 0.3
SMG6-214ENST00000573827 ZNF501Q96CX3 271 aaPredicted RBP16.93■□□□□ 0.3
SMG6-214ENST00000573827 MVB12BQ9H7P6 319 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 FGF21Q9NSA1 209 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 ZKSCAN5Q9Y2L8 839 aa16.93■□□□□ 0.3
SMG6-214ENST00000573827 BTN3A1O00481 513 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 LIN7AO14910 233 aaPredicted RBP16.92■□□□□ 0.3
SMG6-214ENST00000573827 ZBTB11O95625 1053 aaPredicted RBP16.92■□□□□ 0.3
SMG6-214ENST00000573827 APRTP07741 180 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 KCNJ1P48048 391 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 TUBB4BP68371 445 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 ACY1Q03154 408 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 TUBB2AQ13885 445 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 GSE1Q14687 1217 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 AFTPHQ6ULP2 937 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 NAPRTQ6XQN6 538 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 PPP1R21Q6ZMI0 780 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 ZNF517Q6ZMY9 492 aaPredicted RBP16.92■□□□□ 0.3
SMG6-214ENST00000573827 BPHLQ86WA6 291 aaPredicted RBP16.92■□□□□ 0.3
SMG6-214ENST00000573827 RASGRP3Q8IV61 690 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 PRELID2Q8N945 189 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 SLC38A9Q8NBW4 561 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 FLVCR1-AS1Q8TAF5 88 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 LKAAEAR1Q8TD35 194 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 LCN9Q8WX39 176 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 TFGQ92734 400 aaPredicted RBP16.92■□□□□ 0.3
SMG6-214ENST00000573827 FERD3LQ96RJ6 166 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 EFHD1Q9BUP0 239 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 TUBB2BQ9BVA1 445 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 VPS37BQ9H9H4 285 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 PDE7BQ9NP56 450 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 TREX1Q9NSU2 369 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 MARCH4Q9P2E8 410 aaPredicted RBP16.92■□□□□ 0.3
SMG6-214ENST00000573827 LNPEPQ9UIQ6 1025 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 RARRES3Q9UL19 164 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 ICKQ9UPZ9 632 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 CDYLQ9Y232 598 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 PPP2R2CQ9Y2T4 447 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 PCDHGA6Q9Y5G7 932 aa16.92■□□□□ 0.3
SMG6-214ENST00000573827 RP1L1Q8IWN7 2480 aaPredicted RBP16.92■□□□□ 0.3
SMG6-214ENST00000573827 SNRNP200O75643 2136 aaKnown RBP16.91■□□□□ 0.3
SMG6-214ENST00000573827 UBA6A0AVT1 1052 aaPredicted RBP16.91■□□□□ 0.3
SMG6-214ENST00000573827 SLC9B1P1A6NJY1 282 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 FURINP09958 794 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 MSL3P1P0C860 447 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 PRKAR1AP10644 381 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 PRDX3P30048 256 aaKnown RBP16.91■□□□□ 0.3
SMG6-214ENST00000573827 DLSTP36957 453 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 POLE2P56282 527 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 GPR19Q15760 415 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 NLRP9Q7RTR0 991 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 CCDC89Q8N998 374 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 TRIM58Q8NG06 486 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 OR5AR1Q8NGP9 310 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 OR4L1Q8NH43 312 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 CT55Q8WUE5 264 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 CATSPER2Q96P56 530 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 ALS2CR12Q96Q35 445 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 RUFY1Q96T51 708 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 ADNPQ9H2P0 1102 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 SRMSQ9H3Y6 488 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 XKR8Q9H6D3 395 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 LHX9Q9NQ69 397 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 CHRAC1Q9NRG0 131 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 C1GALT1Q9NS00 363 aa16.91■□□□□ 0.3
SMG6-214ENST00000573827 TCRBV7S3A2A0A539 114 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 E7EVH7 732 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 MATN2O00339 956 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 IFRD1O00458 451 aaPredicted RBP16.9■□□□□ 0.3
SMG6-214ENST00000573827 ST6GAL1P15907 406 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 ARNTP27540 789 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 CXCR5P32302 372 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 NFATC3Q12968 1075 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 PRKG2Q13237 762 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 AMIGO1Q86WK6 493 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 ELMO1Q92556 727 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 STAMBPL1Q96FJ0 436 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 ARHGAP9Q9BRR9 750 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 HGH1Q9BTY7 390 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 LATS2Q9NRM7 1088 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 TUBD1Q9UJT1 453 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 PADI1Q9ULC6 663 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 USP9XQ93008 2570 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms