RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 MC2RQ01718 297 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 DHX34Q14147 1143 aaKnown RBP13.05□□□□□ -0.32
RPAIN-207ENST00000570883 MSS51Q4VC12 460 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 CTSL3PQ5NE16 218 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 IZUMO3Q5VZ72 239 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 ANKS6Q68DC2 871 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 CENPUQ71F23 418 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 HOOK3Q86VS8 718 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 OTUD6BQ8N6M0 293 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 ACVR1CQ8NER5 493 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 OR52E1Q8NGJ3 308 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 OR5AR1Q8NGP9 310 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 KLHL6Q8WZ60 621 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 TFGQ92734 400 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-207ENST00000570883 ZDHHC12Q96GR4 267 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 BIRC8Q96P09 236 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 FERD3LQ96RJ6 166 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 DDA1Q9BW61 102 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 CARD6Q9BX69 1037 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 DPH1Q9BZG8 443 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 MVB12BQ9H7P6 319 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 APMAPQ9HDC9 416 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 SLC39A1Q9NY26 324 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 SEMA5BQ9P283 1151 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 MAD1L1Q9Y6D9 718 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 RPS6KL1Q9Y6S9 549 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 COLEC10Q9Y6Z7 277 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 SEC16AO15027 2179 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 KALRNO60229 2985 aa13.05□□□□□ -0.32
RPAIN-207ENST00000570883 IGHV5-51A0A0C4DH38 117 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 UBA6A0AVT1 1052 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-207ENST00000570883 OR6C74A6NCV1 312 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-207ENST00000570883 CCDC188H7C350 402 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 GPC4O75487 556 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 NDUFS3O75489 264 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 RASSF9O75901 435 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 USP1O94782 785 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 TPBGLP0DKB5 382 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 OGNP20774 298 aaKnown RBP13.04□□□□□ -0.32
RPAIN-207ENST00000570883 EIF3BP55884 814 aaKnown RBP13.04□□□□□ -0.32
RPAIN-207ENST00000570883 SH3BP2P78314 561 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 HSPA14Q0VDF9 509 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 PRKG2Q13237 762 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 SRSF6Q13247 344 aaKnown RBP13.04□□□□□ -0.32
RPAIN-207ENST00000570883 KRT33BQ14525 404 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 ZNF789Q5FWF6 425 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 CACHD1Q5VU97 1274 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 ZNF470Q6ECI4 717 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 PTRHD1Q6GMV3 140 aaKnown RBP13.04□□□□□ -0.32
RPAIN-207ENST00000570883 MRNIPQ6NTE8 343 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 NEPROQ6NW34 567 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 ZNF449Q6P9G9 518 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 KLHL35Q6PF15 583 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 SYT10Q6XYQ8 523 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 SYDE1Q6ZW31 735 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-207ENST00000570883 OOSP2Q86WS3 158 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 LRRC6Q86X45 466 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 DTX1Q86Y01 620 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 CILP2Q8IUL8 1156 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 SLC22A15Q8IZD6 547 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 UNC5BQ8IZJ1 945 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 OR4E2Q8NGC2 313 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 LCN9Q8WX39 176 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 STAMBPL1Q96FJ0 436 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 PPM1MQ96MI6 270 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 PWWP2AQ96N64 755 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 RUNDC3BQ96NL0 473 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 MAP3K3Q99759 626 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 CTRCQ99895 268 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 WDR83Q9BRX9 315 aaKnown RBP13.04□□□□□ -0.32
RPAIN-207ENST00000570883 TFB2MQ9H5Q4 396 aaKnown RBP13.04□□□□□ -0.32
RPAIN-207ENST00000570883 XKR8Q9H6D3 395 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 HRASLS2Q9NWW9 162 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 RNF14Q9UBS8 474 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 GNPTGQ9UJJ9 305 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 POMT2Q9UKY4 750 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 ATRXP46100 2492 aa13.04□□□□□ -0.32
RPAIN-207ENST00000570883 MAGEB16A2A368 324 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 TLCD2A6NGC4 264 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 F8W8V4 182 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 BTN3A3O00478 584 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 BTN3A1O00481 513 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 NIPSNAP2O75323 286 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 SLCO2B1O94956 709 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 LIPCP11150 499 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 PAMP19021 973 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 POLR2CP19387 275 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-207ENST00000570883 PAFAH1B1P43034 410 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 KPNA2P52292 529 aaKnown RBP13.03□□□□□ -0.32
RPAIN-207ENST00000570883 RAB15P59190 212 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 MRPS25P82663 173 aaKnown RBP13.03□□□□□ -0.32
RPAIN-207ENST00000570883 PLOD1Q02809 727 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-207ENST00000570883 DHX9Q08211 1270 aaKnown RBP13.03□□□□□ -0.32
RPAIN-207ENST00000570883 KCNAB1Q14722 419 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 DNTTIP2Q5QJE6 756 aaKnown RBP13.03□□□□□ -0.32
RPAIN-207ENST00000570883 RNF187Q5TA31 235 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-207ENST00000570883 TMEM164Q5U3C3 297 aa13.03□□□□□ -0.32
RPAIN-207ENST00000570883 HIBCHQ6NVY1 386 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-207ENST00000570883 IGDCC3Q8IVU1 814 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms