RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ARHGAP15Q53QZ3 475 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 C4orf48Q5BLP8 95 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZMAT1Q5H9K5 638 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZNF618Q5T7W0 954 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PIP5KL1Q5T9C9 394 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 MFSD14CQ5VZR4 134 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ALS2CLQ60I27 953 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 RAET1GQ6H3X3 334 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 METTL2BQ6P1Q9 378 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 DENND1BQ6P3S1 775 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 KCNT2Q6UVM3 1135 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 TMC5Q6UXY8 1006 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CHSY3Q70JA7 882 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 HTR3DQ70Z44 454 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 KCTD9Q7L273 389 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZNF572Q7Z3I7 529 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 SPATA19Q7Z5L4 167 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 TMC3Q7Z5M5 1100 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ADCK2Q7Z695 626 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 YTHDF3Q7Z739 585 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 NT5DC3Q86UY8 548 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZNF410Q86VK4 478 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZC3H18Q86VM9 953 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 FAM131BQ86XD5 332 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZNF573Q86YE8 665 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 KLHL7Q8IXQ5 586 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CFAP206Q8IYR0 622 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 FSTL5Q8N475 847 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 LIX1Q8N485 282 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMG6-208ENST00000570874 ENDOVQ8N8Q3 282 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 C12orf50Q8NA57 414 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 KDM1BQ8NB78 822 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 GLIS1Q8NBF1 620 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 LEMD2Q8NC56 503 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SMG8Q8ND04 991 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZNF680Q8NEM1 530 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 KLHDC9Q8NEP7 349 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 TRPV3Q8NET8 790 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 TMIEQ8NEW7 156 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 OR2T34Q8NGX1 318 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ANGPTL6Q8NI99 470 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SCAMP5Q8TAC9 235 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SNIP1Q8TAD8 396 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 LRRC8CQ8TDW0 803 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 MITD1Q8WV92 249 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 TSEN15Q8WW01 171 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 TNFRSF14Q92956 283 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 LPPQ93052 612 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 NMD3Q96D46 503 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 FAM122AQ96E09 287 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SLC35A4Q96G79 324 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 C1orf159Q96HA4 380 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 HES6Q96HZ4 224 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ANKRD36BP1Q96IX9 119 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ELMO2Q96JJ3 720 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 HHIPL1Q96JK4 782 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SLC6A18Q96N87 628 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 OR1F2PQ96R84 312 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 NR1H4Q96RI1 486 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 CIB1Q99828 191 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 MRPL45Q9BRJ2 306 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 C11orf70Q9BRQ4 267 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CCM2Q9BSQ5 444 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SLC25A23Q9BV35 468 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 BOCQ9BWV1 1114 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 MRPL1Q9BYD6 325 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 KRTAP17-1Q9BYP8 105 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 TINAGL1Q9GZM7 467 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 ELOVL4Q9GZR5 314 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 AGO3Q9H9G7 860 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 CHODLQ9H9P2 273 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 EPB41L5Q9HCM4 733 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 MRPL40Q9NQ50 206 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 MIOSQ9NXC5 875 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DPP3Q9NY33 737 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 TAS2R7Q9NYW3 318 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 RCOR3Q9P2K3 495 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 GULP1Q9UBP9 304 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 KLHL3Q9UH77 587 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ASIC3Q9UHC3 531 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 OSGIN1Q9UJX0 560 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SNX12Q9UMY4 172 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ERVK-11Q9UQG0 969 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DNAJC16Q9Y2G8 782 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 Q9Y3F1 56 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 NR2E1Q9Y466 385 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PLEKHM1Q9Y4G2 1056 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 MAB21L2Q9Y586 359 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CORINQ9Y5Q5 1042 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CFAP20Q9Y6A4 193 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 SAR1BQ9Y6B6 198 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 AP4B1Q9Y6B7 739 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 BZW2Q9Y6E2 419 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 TEX264Q9Y6I9 313 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 COL4A4P53420 1690 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 A0A096LPE4 126 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 A0A0A6YYK5 440 aaPredicted RBP3.5□□□□□ -1.85
SMG6-208ENST00000570874 A0A1W2PPZ6 126 aa3.5□□□□□ -1.85
SMG6-208ENST00000570874 TCRBV5S1A1TA0A578 114 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms