RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 DNALI1O14645 258 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 VILLO15195 856 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 FLRT2O43155 660 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 PENKP01210 267 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 PDGFAP04085 211 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 ALPIP09923 528 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 FGFR3P22607 806 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 HMOX2P30519 316 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 CLCQ05315 142 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 CAPRIN1Q14444 709 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 BEX5Q5H9J7 111 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 SAPCD1Q5SSQ6 148 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 PAPD7Q5XG87 772 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 SLC8B1Q6J4K2 584 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 LAYNQ6UX15 382 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 RTN4RL1Q86UN2 441 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 MIB1Q86YT6 1006 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 KBTBD2Q8IY47 623 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 CMTM8Q8IZV2 173 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 C11orf65Q8NCR3 313 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 AUTS2Q8WXX7 1259 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 IFT81Q8WYA0 676 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 PSMG2Q969U7 264 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 FAM120BQ96EK7 910 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 ANKRD27Q96NW4 1050 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 OLFM3Q96PB7 478 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 PARD6GQ9BYG4 376 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 RIMS4Q9H426 269 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 INTS9Q9NV88 658 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 GULP1Q9UBP9 304 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 CYB5R1Q9UHQ9 305 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 PCDHGB1Q9Y5G3 927 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 ZSWIM8A7E2V4 1837 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 PGRMC1O00264 195 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 GPR32O75388 356 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 CSDE1O75534 798 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 PAEPP09466 180 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 MLNP12872 115 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 CALB2P22676 271 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 CAPZA2P47755 286 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 MAMLD1Q13495 774 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 FGL2Q14314 439 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 NAPEPLDQ6IQ20 393 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 RWDD4Q6NW29 188 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 FOXR1Q6PIV2 292 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 TMEM200AQ86VY9 491 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 CDR2LQ86X02 465 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 LRTOMTQ8WZ04 291 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 KREMEN1Q96MU8 473 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 C7orf26Q96N11 449 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 NAPGQ99747 312 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 TREX2Q9BQ50 279 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 MRPL1Q9BYD6 325 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 SUV39H2Q9H5I1 410 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 SYTL2Q9HCH5 934 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 SEPSECSQ9HD40 501 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 HYOU1Q9Y4L1 999 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 NOX1Q9Y5S8 564 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 MFSD2BA6NFX1 497 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 GPR171O14626 319 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 SCGB2A1O75556 95 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 UBXN7O94888 489 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 OAZ2O95190 189 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 MOCS2O96007 188 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 ARFIP2P53365 341 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 GRM2Q14416 872 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 PDCD4Q53EL6 469 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 FSTL4Q6MZW2 842 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 KIAA1161Q6NSJ0 714 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 MFSD7Q6UXD7 560 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 SLC9A9Q8IVB4 645 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 SCUBE3Q8IX30 993 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 LNX2Q8N448 690 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 DQX1Q8TE96 717 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 GAB3Q8WWW8 586 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 SELENOMQ8WWX9 145 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 MAGED4Q96JG8 741 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 ZFP42Q96MM3 310 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 CACNG6Q9BXT2 260 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 SEMA4CQ9C0C4 833 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 GBA3Q9H227 469 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 FKBPLQ9UIM3 349 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 STRAPQ9Y3F4 350 aaKnown RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 CPQQ9Y646 472 aa6.55□□□□□ -1.36
SMG1-217ENST00000569764 TRIP12Q14669 1992 aaPredicted RBP6.55□□□□□ -1.36
SMG1-217ENST00000569764 EFCAB8A8MWE9 144 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 KPNA3O00505 521 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 PJA2O43164 708 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 KAT7O95251 611 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 KLF8O95600 359 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 RAB3DO95716 219 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 MYBL1P10243 752 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PTNP21246 168 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 CYLC1P35663 651 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 KCNC1P48547 511 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 PER3P56645 1201 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 HNRNPKP61978 463 aaKnown RBP eCLIP6.54□□□□□ -1.36
SMG1-217ENST00000569764 GALK2Q01415 458 aa6.54□□□□□ -1.36
SMG1-217ENST00000569764 DRAP1Q14919 205 aaPredicted RBP6.54□□□□□ -1.36
SMG1-217ENST00000569764 TRADDQ15628 312 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms