RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ANKRD12Q6UB98 2062 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 ZCWPW2A0A1B0GU75 182 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 UBA6A0AVT1 1052 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 IQCF5A8MTL0 148 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 SMAPO00193 183 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 KLK10O43240 276 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 GPC4O75487 556 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 RASSF9O75901 435 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 ITGB6P18564 788 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 CD82P27701 267 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 ACADLP28330 430 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 RAB15P59190 212 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 MC2RQ01718 297 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 HSPA14Q0VDF9 509 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 THOC5Q13769 683 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 MORF4L2Q15014 288 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 TYSND1Q2T9J0 566 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 DCAF12Q5T6F0 453 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 CACHD1Q5VU97 1274 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 FAM92BQ6ZTR7 304 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 PRSS42Q7Z5A4 293 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 CILP2Q8IUL8 1156 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 AGGF1Q8N302 714 aaeCLIP13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 OR4E2Q8NGC2 313 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 LCN9Q8WX39 176 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 STAMBPL1Q96FJ0 436 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 KRT12Q99456 494 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 DDA1Q9BW61 102 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 ASPSCR1Q9BZE9 553 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 ZNF768Q9H5H4 540 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 TFB2MQ9H5Q4 396 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 FBXO8Q9NRD0 319 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 ASF1AQ9Y294 204 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 VPS9D1Q9Y2B5 631 aa13.45□□□□□ -0.26
HERPUD1-218ENST00000569569 OR6C74A6NCV1 312 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 BHMG1C9JSJ3 638 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 KPNA5O15131 536 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 TTI1O43156 1089 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 KIF1CO43896 1103 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 APOA4P06727 396 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 AOAHP28039 575 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 SEPHS1P49903 392 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 CSE1LP55060 971 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 ADARP55265 1226 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 EIF3BP55884 814 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 TLE3Q04726 772 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 DHX9Q08211 1270 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 PRKAA1Q13131 559 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 LONRF1Q17RB8 773 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 COL28A1Q2UY09 1125 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 BROXQ5VW32 411 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 ARMC6Q6NXE6 501 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 CEACAM20Q6UY09 585 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 LMNTD2Q8IXW0 634 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 TBC1D21Q8IYX1 336 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 SLC22A15Q8IZD6 547 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 KRT222Q8N1A0 295 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 SPATA4Q8NEY3 305 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 OR52E1Q8NGJ3 308 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 LKAAEAR1Q8TD35 194 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 KLHL6Q8WZ60 621 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 UBXN4Q92575 508 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 LPGAT1Q92604 370 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 BIRC8Q96P09 236 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 TEFMQ96QE5 360 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 CD180Q99467 661 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 ZPBPQ9BS86 351 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 TRIM51Q9BSJ1 452 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 NAT9Q9BTE0 207 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 TRIT1Q9H3H1 467 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 SRMSQ9H3Y6 488 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 INTS10Q9NVR2 710 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 IL1RAPL1Q9NZN1 696 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 FOXJ2Q9P0K8 574 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 SEMA5BQ9P283 1151 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 POLG2Q9UHN1 485 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 CDYLQ9Y232 598 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 B3GALT1Q9Y5Z6 326 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 FAM169AQ9Y6X4 670 aa13.44□□□□□ -0.26
HERPUD1-218ENST00000569569 EFCAB8A8MWE9 144 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 H3BMM5 538 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 MATN2O00339 956 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 SEC16AO15027 2179 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 POLR1CO15160 346 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 SLCO2B1O94956 709 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 TTC4O95801 387 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 ESR1P03372 595 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 LIPCP11150 499 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 PGAM1P18669 254 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 POLR2CP19387 275 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 FMO4P31512 558 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 UCNP55089 124 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 PPP1CAP62136 330 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 PRKG2Q13237 762 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 CLN3Q13286 438 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 TMED2Q15363 201 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 DNAJC21Q5F1R6 531 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 CTSL3PQ5NE16 218 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 DNTTIP2Q5QJE6 756 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms