RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 KMOO15229 486 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 KLRC4O43908 158 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 PRAMEF11O60813 436 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 OR2B3O76000 313 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 WFS1O76024 890 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 SOX30O94993 753 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 FREM3P0C091 2139 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 ACPPP15309 386 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 ST6GAL1P15907 406 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 ITGAXP20702 1163 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 EEF1DP29692 281 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 SOX18P35713 384 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 HALP42357 657 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 SCNN1BP51168 640 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 DRG2P55039 364 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 CAPRIN1Q14444 709 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 TDRD12Q587J7 1177 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 ABHD17BQ5VST6 288 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 KAZNQ674X7 775 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 LRRC66Q68CR7 880 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 TXNRD3NBQ6F5E7 133 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 CDHR3Q6ZTQ4 885 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 NDUFAF7Q7L592 441 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 FAM131BQ86XD5 332 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 ZDHHC17Q8IUH5 632 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 LIX1LQ8IVB5 337 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 MCATQ8IVS2 390 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 ARHGAP12Q8IWW6 846 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 PPM1KQ8N3J5 372 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 IQUBQ8NA54 791 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 FAM98AQ8NCA5 519 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 C1orf131Q8NDD1 294 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 MDS2Q8NDY4 140 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 DHX58Q96C10 678 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 WDR24Q96S15 920 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 PITPNM3Q9BZ71 974 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 YAE1D1Q9NRH1 226 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 TXLNGQ9NUQ3 528 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 GNPTGQ9UJJ9 305 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 ALG6Q9Y672 507 aa6.33□□□□□ -1.4
HERPUD1-217ENST00000569429 A0A087X1B8 175 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 NSG1A0A0A6YYJ2 146 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 A0A1B0GTH9 108 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 A0A1W2PQ72 361 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 GSAPA4D1B5 854 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 OR6C74A6NCV1 312 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 VSTM2BA6NLU5 285 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 CLCA1A8K7I4 914 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 FADS2P1A8MWK0 482 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 ZSCAN9O15535 394 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 PALMO75781 387 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 LETM1O95202 739 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 HRGP04196 525 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 TP53P04637 393 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 UQCRHP07919 91 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 PIM1P11309 404 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 NID1P14543 1247 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 IL4RP24394 825 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 TACR1P25103 407 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 PTGER1P34995 402 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 RBMXP38159 391 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 NSG1P42857 185 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 ARSEP51690 589 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 STC1P52823 247 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 SNX16P57768 344 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 AP2B1P63010 937 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 PRKAA1Q13131 559 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 CUL4BQ13620 913 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 RFTN1Q14699 578 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 PTPRRQ15256 657 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 RPE65Q16518 533 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 HYAL4Q2M3T9 481 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 EMC4Q5J8M3 183 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 HENMT1Q5T8I9 393 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 TLDC1Q6P9B6 456 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 CRTC3Q6UUV7 619 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 C12orf54Q6X4T0 127 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 LRRTM4Q86VH4 590 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 MEX3DQ86XN8 651 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 UMODL1-AS1Q8N2C9 162 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 TMEM178AQ8NBL3 297 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 PERPQ96FX8 193 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 CINPQ9BW66 212 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 GSX2Q9BZM3 304 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 KLHL25Q9H0H3 589 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 OR2AG1Q9H205 316 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 TRIM39Q9HCM9 518 aa6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 SAMSN1Q9NSI8 373 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-217ENST00000569429 KIAA1549Q9HCM3 1950 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 DOCK7Q96N67 2140 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 A0A0G2JNJ9 132 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 A8MV72 311 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 KCNJ13O60928 360 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 PGRP06401 933 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 COX6A1P12074 109 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 CD46P15529 392 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 ZNF24P17028 368 aa6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 POLR2CP19387 275 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 PRDX3P30048 256 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-217ENST00000569429 UQCRC1P31930 480 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms