RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 TLCD2A6NGC4 264 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 EIF4E1BA6NMX2 242 aaKnown RBP17.05■□□□□ 0.32
EDC3-215ENST00000569007 USP27XA6NNY8 438 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 F8W8V4 182 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 ERVH48-1M5A8F1 160 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 ZNF185O15231 689 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 AVILO75366 819 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 ITGB6P18564 788 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 POLR2CP19387 275 aaPredicted RBP17.05■□□□□ 0.32
EDC3-215ENST00000569007 PRKG2Q13237 762 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 IL11RAQ14626 422 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 KCNAB1Q14722 419 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 TAF1BQ53T94 588 aaPredicted RBP17.05■□□□□ 0.32
EDC3-215ENST00000569007 NLGN4XQ8N0W4 816 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 SIDT2Q8NBJ9 832 aaKnown RBP17.05■□□□□ 0.32
EDC3-215ENST00000569007 NLGN4YQ8NFZ3 816 aaPredicted RBP17.05■□□□□ 0.32
EDC3-215ENST00000569007 OR52E1Q8NGJ3 308 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 SLC39A7Q92504 469 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 TTC9Q92623 222 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 ELMO2Q96JJ3 720 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 PDLIM2Q96JY6 352 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 SRMSQ9H3Y6 488 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 MRM3Q9HC36 420 aaKnown RBP17.05■□□□□ 0.32
EDC3-215ENST00000569007 NEU2Q9Y3R4 380 aa17.05■□□□□ 0.32
EDC3-215ENST00000569007 FASNP49327 2511 aaKnown RBP17.04■□□□□ 0.32
EDC3-215ENST00000569007 BHMG1C9JSJ3 638 aaPredicted RBP17.04■□□□□ 0.32
EDC3-215ENST00000569007 PHF2O75151 1096 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 TMEM63AO94886 807 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 DLGAP3O95886 979 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 FGF5P12034 268 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 LIFP15018 202 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 FOLR1P15328 257 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 ZNF28P17035 718 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 MAP4P27816 1152 aaKnown RBP17.04■□□□□ 0.32
EDC3-215ENST00000569007 ACADLP28330 430 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 TTPAP49638 278 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 ARL4DP49703 201 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 KPNA2P52292 529 aaKnown RBP17.04■□□□□ 0.32
EDC3-215ENST00000569007 CSE1LP55060 971 aaKnown RBP17.04■□□□□ 0.32
EDC3-215ENST00000569007 SARNPP82979 210 aaKnown RBP17.04■□□□□ 0.32
EDC3-215ENST00000569007 PRKAA1Q13131 559 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 FBXO38Q6PIJ6 1188 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 CAND1Q86VP6 1230 aaKnown RBP17.04■□□□□ 0.32
EDC3-215ENST00000569007 KMT5CQ86Y97 462 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 ZSCAN1Q8NBB4 408 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 LSM14AQ8ND56 463 aaKnown RBP17.04■□□□□ 0.32
EDC3-215ENST00000569007 OR5AR1Q8NGP9 310 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 LKAAEAR1Q8TD35 194 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 CPT1BQ92523 772 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 MFSD3Q96ES6 412 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 PPM1MQ96MI6 270 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 ULBP3Q9BZM4 244 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 TFB2MQ9H5Q4 396 aaKnown RBP17.04■□□□□ 0.32
EDC3-215ENST00000569007 POMT2Q9UKY4 750 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 SOX13Q9UN79 622 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 ASF1AQ9Y294 204 aa17.04■□□□□ 0.32
EDC3-215ENST00000569007 GOLGA6L10A0A0M3HER8 536 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 GSAPA4D1B5 854 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 IQCF5A8MTL0 148 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 BTN3A3O00478 584 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 CES2O00748 559 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 PRMT5O14744 637 aaPredicted RBP17.03■□□□□ 0.32
EDC3-215ENST00000569007 VAPBO95292 243 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 PRB1P04280 392 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 EBLN1P0CF75 366 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 ARNTP27540 789 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 CCR7P32248 378 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 CYP4F2P78329 520 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 PLOD1Q02809 727 aaPredicted RBP17.03■□□□□ 0.32
EDC3-215ENST00000569007 TUBB3Q13509 450 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 RASGRP3Q8IV61 690 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 UNC5BQ8IZJ1 945 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 MPP5Q8N3R9 675 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 OTUD6BQ8N6M0 293 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 CARD6Q9BX69 1037 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 XKR8Q9H6D3 395 aa17.03■□□□□ 0.32
EDC3-215ENST00000569007 LOC101059948A0A1B0GTJ6 334 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 GOLGA8KD6RF30 607 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 GOLGA8TH3BQL2 631 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 GOLGA8MH3BSY2 632 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 TK2O00142 265 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 BTN3A1O00481 513 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 NDUFS3O75489 264 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 SPAG6O75602 509 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 KIAA0754O94854 1291 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 ZBTB11O95625 1053 aaPredicted RBP17.02■□□□□ 0.32
EDC3-215ENST00000569007 FNTAP49354 379 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 HSD11B2P80365 405 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 HSPA14Q0VDF9 509 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.02■□□□□ 0.32
EDC3-215ENST00000569007 CASC4Q6P4E1 433 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 CYB5D1Q6P9G0 228 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 AMIGO1Q86WK6 493 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 PPP1R3BQ86XI6 285 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 CARFQ8N187 725 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 KRT222Q8N1A0 295 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 D2HGDHQ8N465 521 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 MCUQ8NE86 351 aa17.02■□□□□ 0.32
EDC3-215ENST00000569007 KIAA1143Q96AT1 154 aaPredicted RBP17.02■□□□□ 0.32
EDC3-215ENST00000569007 WBP1Q96G27 269 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms