RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 PRKAA1Q13131 559 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 LAMB3Q13751 1172 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 PRAMEF17Q5VTA0 474 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 TXLNBQ8N3L3 684 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 LCN9Q8WX39 176 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 TLR10Q9BXR5 811 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 TWSG1Q9GZX9 223 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 SRMSQ9H3Y6 488 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 ACTL8Q9H568 366 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 VPS37BQ9H9H4 285 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 C1GALT1Q9NS00 363 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 KCND1Q9NSA2 647 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 SOHLH2Q9NX45 425 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 PRSS21Q9Y6M0 314 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 SEC16AO15027 2179 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 HECTD1Q9ULT8 2610 aa17.8■□□□□ 0.44
USB1-213ENST00000566292 K7EM74 188 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 MATN2O00339 956 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 IFRD1O00458 451 aaPredicted RBP17.79■□□□□ 0.44
USB1-213ENST00000566292 BTN3A1O00481 513 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 PSMD3O43242 534 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 CPNE3O75131 537 aaKnown RBP17.79■□□□□ 0.44
USB1-213ENST00000566292 NR1D1P20393 614 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 CDH3P22223 829 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 CD151P48509 253 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 RPA4Q13156 261 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 GPS2Q13227 327 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 CCDC38Q502W7 563 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 LACTB2Q53H82 288 aaPredicted RBP17.79■□□□□ 0.44
USB1-213ENST00000566292 TMTC4Q5T4D3 741 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 TMEM126BQ8IUX1 230 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 SPC24Q8NBT2 197 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 SLC38A9Q8NBW4 561 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 OR52E1Q8NGJ3 308 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 OR52K1Q8NGK4 314 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 OR8K5Q8NH50 307 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 TFB2MQ9H5Q4 396 aaKnown RBP17.79■□□□□ 0.44
USB1-213ENST00000566292 LATS2Q9NRM7 1088 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 SMARCAL1Q9NZC9 954 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 IMPACTQ9P2X3 320 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 ANAPC2Q9UJX6 822 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 TP53TG5Q9Y2B4 290 aa17.79■□□□□ 0.44
USB1-213ENST00000566292 FER1L5A0AVI2 2057 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 GSAPA4D1B5 854 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 ST6GAL1P15907 406 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 MSNP26038 577 aaKnown RBP17.78■□□□□ 0.44
USB1-213ENST00000566292 PTPN4P29074 926 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 PRDX3P30048 256 aaKnown RBP17.78■□□□□ 0.44
USB1-213ENST00000566292 CDC25BP30305 580 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 FOXN2P32314 431 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 CASRP41180 1078 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 ABRQ12979 859 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 PRKG2Q13237 762 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 BOP1Q14137 746 aaKnown RBP17.78■□□□□ 0.44
USB1-213ENST00000566292 OASLQ15646 514 aaKnown RBP17.78■□□□□ 0.44
USB1-213ENST00000566292 ZNF517Q6ZMY9 492 aaPredicted RBP17.78■□□□□ 0.44
USB1-213ENST00000566292 LINC00523Q86TU6 105 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 TFGQ92734 400 aaPredicted RBP17.78■□□□□ 0.44
USB1-213ENST00000566292 HGH1Q9BTY7 390 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 GPR87Q9BY21 358 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 XKR8Q9H6D3 395 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 MVB12BQ9H7P6 319 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 PTPN13Q12923 2485 aa17.78■□□□□ 0.44
USB1-213ENST00000566292 CCDC162PA2VCL2 907 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 LIASO43766 372 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 AP2A2O94973 939 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 GSTM1P09488 218 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 GRIA1P42261 906 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 NSG1P42857 185 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 PMS2P54278 862 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 GSTM4Q03013 218 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 CDH17Q12864 832 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 ITIH4Q14624 930 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 COLEC12Q5KU26 742 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 LCN10Q6JVE6 187 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 PACS1Q6VY07 963 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 ADGRF3Q8IZF5 1079 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 RNF10Q8N5U6 811 aaKnown RBP17.77■□□□□ 0.44
USB1-213ENST00000566292 OR13J1Q8NGT2 312 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 OR1L3Q8NH93 324 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 MR1Q95460 341 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 ALS2CR12Q96Q35 445 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 PITPNM3Q9BZ71 974 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 ETNK1Q9HBU6 452 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 SLC2A6Q9UGQ3 507 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 TLK1Q9UKI8 766 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 MAN2B2Q9Y2E5 1009 aa17.77■□□□□ 0.44
USB1-213ENST00000566292 CCDC88CQ9P219 2028 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 MKRN2OSH3BPM6 223 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 RFPL1O75677 317 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 PVRP15151 417 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 ACADLP28330 430 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 STIP1P31948 543 aaKnown RBP17.76■□□□□ 0.43
USB1-213ENST00000566292 LMAN1P49257 510 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 IL10RAQ13651 578 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 UGT8Q16880 541 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 ZNF789Q5FWF6 425 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 PLEKHS1Q5SXH7 462 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 SEL1L2Q5TEA6 688 aa17.76■□□□□ 0.43
USB1-213ENST00000566292 ZNF449Q6P9G9 518 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms