RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 PFDN6O15212 129 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 TOX3O15405 576 aaPredicted RBP17.2■□□□□ 0.34
MSLN-206ENST00000566269 LIPCP11150 499 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 CD82P27701 267 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 CASQ1P31415 396 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 CCR7P32248 378 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 MAGEA3P43357 314 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 PLOD1Q02809 727 aaPredicted RBP17.2■□□□□ 0.34
MSLN-206ENST00000566269 HSPA14Q0VDF9 509 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 PRKG2Q13237 762 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 TMED2Q15363 201 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 ANKRD20A4Q4UJ75 823 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 DCAF12Q5T6F0 453 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 RNF187Q5TA31 235 aaPredicted RBP17.2■□□□□ 0.34
MSLN-206ENST00000566269 SYDE1Q6ZW31 735 aaPredicted RBP17.2■□□□□ 0.34
MSLN-206ENST00000566269 PCGF5Q86SE9 256 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 BMPERQ8N8U9 685 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 OR4E2Q8NGC2 313 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 OR52E1Q8NGJ3 308 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 TRIM51Q9BSJ1 452 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 CARD6Q9BX69 1037 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 ASPSCR1Q9BZE9 553 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 RAB33BQ9H082 229 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 SRMSQ9H3Y6 488 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 ZNF768Q9H5H4 540 aaKnown RBP17.2■□□□□ 0.34
MSLN-206ENST00000566269 RNF14Q9UBS8 474 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 ASF1AQ9Y294 204 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 PCDHGA3Q9Y5H0 932 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 SDK2Q58EX2 2172 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 MGAQ8IWI9 3026 aa17.2■□□□□ 0.34
MSLN-206ENST00000566269 IGSF10Q6WRI0 2623 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 TTI1O43156 1089 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 APOA4P06727 396 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 POLR2CP19387 275 aaPredicted RBP17.19■□□□□ 0.34
MSLN-206ENST00000566269 RPS3P23396 243 aaKnown RBP eCLIP17.19■□□□□ 0.34
MSLN-206ENST00000566269 UCNP55089 124 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 TMPRSS3P57727 454 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 CXADRP78310 365 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 MC2RQ01718 297 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 FOXM1Q08050 763 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 PRKAA1Q13131 559 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 THOC5Q13769 683 aaKnown RBP17.19■□□□□ 0.34
MSLN-206ENST00000566269 TGIF1Q15583 401 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 TYSND1Q2T9J0 566 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 ZNF470Q6ECI4 717 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 NEPROQ6NW34 567 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 CEACAM20Q6UY09 585 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 HOOK3Q86VS8 718 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 LRRC6Q86X45 466 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 AGGF1Q8N302 714 aaeCLIP17.19■□□□□ 0.34
MSLN-206ENST00000566269 OR5AR1Q8NGP9 310 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 STAMBPL1Q96FJ0 436 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 FCRL3Q96P31 734 aaPredicted RBP17.19■□□□□ 0.34
MSLN-206ENST00000566269 PANX3Q96QZ0 392 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 B3GNT4Q9C0J1 378 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 P2RY12Q9H244 342 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 TRIT1Q9H3H1 467 aaKnown RBP17.19■□□□□ 0.34
MSLN-206ENST00000566269 APMAPQ9HDC9 416 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 SIDT1Q9NXL6 827 aaKnown RBP17.19■□□□□ 0.34
MSLN-206ENST00000566269 RALYQ9UKM9 306 aaKnown RBP17.19■□□□□ 0.34
MSLN-206ENST00000566269 PCDHB11Q9Y5F2 797 aa17.19■□□□□ 0.34
MSLN-206ENST00000566269 GSAPA4D1B5 854 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 TLCD2A6NGC4 264 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 BHMG1C9JSJ3 638 aaPredicted RBP17.18■□□□□ 0.34
MSLN-206ENST00000566269 STMND1H3BQB6 276 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 POLR1CO15160 346 aaPredicted RBP17.18■□□□□ 0.34
MSLN-206ENST00000566269 BANF1O75531 89 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 OGNP20774 298 aaKnown RBP17.18■□□□□ 0.34
MSLN-206ENST00000566269 FMO4P31512 558 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 ARL4DP49703 201 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 ETF1P62495 437 aaKnown RBP17.18■□□□□ 0.34
MSLN-206ENST00000566269 SH3BP2P78314 561 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 DNAJC21Q5F1R6 531 aaKnown RBP17.18■□□□□ 0.34
MSLN-206ENST00000566269 CTSL3PQ5NE16 218 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 SYT10Q6XYQ8 523 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 GSDMBQ8TAX9 411 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 ASZ1Q8WWH4 475 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 UBXN4Q92575 508 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 LPGAT1Q92604 370 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 SIGLEC10Q96LC7 697 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 TEFMQ96QE5 360 aaKnown RBP17.18■□□□□ 0.34
MSLN-206ENST00000566269 KRT12Q99456 494 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 CD180Q99467 661 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 NRTNQ99748 197 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 MAP3K3Q99759 626 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 TRIM31Q9BZY9 425 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 XKR8Q9H6D3 395 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 CPNE5Q9HCH3 593 aa17.18■□□□□ 0.34
MSLN-206ENST00000566269 C20orf96Q9NUD7 363 aaPredicted RBP17.18■□□□□ 0.34
MSLN-206ENST00000566269 TDRKHQ9Y2W6 561 aaKnown RBP17.18■□□□□ 0.34
MSLN-206ENST00000566269 IGHV5-51A0A0C4DH38 117 aa17.17■□□□□ 0.34
MSLN-206ENST00000566269 USP1O94782 785 aa17.17■□□□□ 0.34
MSLN-206ENST00000566269 PGAM1P18669 254 aa17.17■□□□□ 0.34
MSLN-206ENST00000566269 AOAHP28039 575 aa17.17■□□□□ 0.34
MSLN-206ENST00000566269 ACADLP28330 430 aa17.17■□□□□ 0.34
MSLN-206ENST00000566269 DHX9Q08211 1270 aaKnown RBP17.17■□□□□ 0.34
MSLN-206ENST00000566269 LONRF1Q17RB8 773 aa17.17■□□□□ 0.34
MSLN-206ENST00000566269 BBS9Q3SYG4 887 aa17.17■□□□□ 0.34
MSLN-206ENST00000566269 TMEM135Q86UB9 458 aa17.17■□□□□ 0.34
MSLN-206ENST00000566269 CILP2Q8IUL8 1156 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms