RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ELMO1Q92556 727 aa16.73■□□□□ 0.27
CDC42BPB-208ENST00000561271 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDC42BPB-208ENST00000561271 RANBP9Q96S59 729 aa16.73■□□□□ 0.27
CDC42BPB-208ENST00000561271 EFHD1Q9BUP0 239 aa16.73■□□□□ 0.27
CDC42BPB-208ENST00000561271 PDE7BQ9NP56 450 aa16.73■□□□□ 0.27
CDC42BPB-208ENST00000561271 FGF21Q9NSA1 209 aa16.73■□□□□ 0.27
CDC42BPB-208ENST00000561271 SOHLH2Q9NX45 425 aa16.73■□□□□ 0.27
CDC42BPB-208ENST00000561271 CROTQ9UKG9 612 aa16.73■□□□□ 0.27
CDC42BPB-208ENST00000561271 POMT2Q9UKY4 750 aa16.73■□□□□ 0.27
CDC42BPB-208ENST00000561271 GOLGA6L3A6NEY3 463 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 B8ZZF3 427 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 BTN3A1O00481 513 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 OR1I1O60431 355 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 ADRA1DP25100 572 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 CXCR5P32302 372 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 HSD11B2P80365 405 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 BASP1P80723 227 aaKnown RBP16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 NFKB2Q00653 900 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 PRKAA1Q13131 559 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 RPA4Q13156 261 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 SEMA3AQ14563 771 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 BRD3Q15059 726 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 PWWP2BQ6NUJ5 590 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 C16orf46Q6P387 395 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 CYB5D1Q6P9G0 228 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 D2HGDHQ8N465 521 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 PPHLN1Q8NEY8 458 aaKnown RBP16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 TRIM58Q8NG06 486 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 OR52E1Q8NGJ3 308 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 SRMSQ9H3Y6 488 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 PPP2R2CQ9Y2T4 447 aa16.72■□□□□ 0.27
CDC42BPB-208ENST00000561271 NBASA2RRP1 2371 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 BTN3A3O00478 584 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 LIN7AO14910 233 aaPredicted RBP16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 CEP104O60308 925 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 ZBTB11O95625 1053 aaPredicted RBP16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 FTH1P02794 183 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 GSTM1P09488 218 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 ITGB6P18564 788 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 CDH3P22223 829 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 KCNJ1P48048 391 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 CD151P48509 253 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 POLE2P56282 527 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 SESN2P58004 480 aaPredicted RBP16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 CRADDP78560 199 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 GSTM4Q03013 218 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 ACY1Q03154 408 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 ACVR1Q04771 509 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 PRKG2Q13237 762 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 SYTL3Q4VX76 610 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 ZNF449Q6P9G9 518 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 DRICH1Q6PGQ1 229 aaPredicted RBP16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 ZNF534Q76KX8 674 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 GSTA5Q7RTV2 222 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 OR5AR1Q8NGP9 310 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 OR6P1Q8NGX9 317 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 TFGQ92734 400 aaPredicted RBP16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 XKR8Q9H6D3 395 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 MVB12BQ9H7P6 319 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 EIF2B3Q9NR50 452 aaKnown RBP16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 RIMKLBQ9ULI2 386 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 BTRCQ9Y297 605 aa16.71■□□□□ 0.27
CDC42BPB-208ENST00000561271 SLC9B1P1A6NJY1 282 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 PYCARD-AS1I3L0S3 204 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 QSOX1O00391 747 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 TERTO14746 1132 aaKnown RBP16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 NTRK1P04629 796 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 TCN2P20062 427 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 CSE1LP55060 971 aaKnown RBP16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 PRAMEP78395 509 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 LAMB3Q13751 1172 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 PRICKLE2Q7Z3G6 844 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 LDB1Q86U70 411 aaPredicted RBP16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 OR4L1Q8NH43 312 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 LKAAEAR1Q8TD35 194 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 CT55Q8WUE5 264 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 CATSPER2Q96P56 530 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 STARD5Q9NSY2 213 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 ICKQ9UPZ9 632 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 ZKSCAN5Q9Y2L8 839 aa16.7■□□□□ 0.26
CDC42BPB-208ENST00000561271 MATN2O00339 956 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 SLC28A2O43868 658 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 KATNA1O75449 491 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 OR56A5P0C7T3 313 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 PVRP15151 417 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 ST6GAL1P15907 406 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 CCR10P46092 362 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 TERF1P54274 439 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 TUBB4BP68371 445 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 DNASE1L3Q13609 305 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 TUBB2AQ13885 445 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 DEFB109BQ30KR1 87 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 FASTKD1Q53R41 847 aaKnown RBP16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 TMTC4Q5T4D3 741 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 LYPLAL1Q5VWZ2 237 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 NLRP9Q7RTR0 991 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 AMIGO1Q86WK6 493 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 TMEM126BQ8IUX1 230 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 CARFQ8N187 725 aa16.69■□□□□ 0.26
CDC42BPB-208ENST00000561271 MAIP1Q8WWC4 291 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms