RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	ATAD3A	Q9NVI7	634 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	TMEM181	Q9P2C4	612 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	AMACR	Q9UHK6	382 aa		3.05	□□□□□ -1.92
SLTM-223	ENST00000560532	PAPSS1	O43252	624 aa	Predicted RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	DOK2	O60496	412 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	RSL1D1	O76021	490 aa	Known RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	NADK	O95544	446 aa	Predicted RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	PLA2G4B	P0C869	781 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	MMP9	P14780	707 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	ARF3	P61204	181 aa	Predicted RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	ARF1	P84077	181 aa	Known RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	CXCL9	Q07325	125 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	PNRC1	Q12796	327 aa	Predicted RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	PRKAA1	Q13131	559 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	KCNC3	Q14003	757 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	GCNT6	Q5T4J0	391 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	ADAMTSL4-AS1	Q5T5F5	129 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	DENND5B	Q6ZUT9	1274 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	CRYBG2	Q8N1P7	616 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	GMPPA	Q96IJ6	420 aa	Predicted RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	CEP295NL	Q96MC4	621 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	TREX2	Q9BQ50	279 aa	Predicted RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	FTO	Q9C0B1	505 aa	Known RBP eCLIP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	ZHX3	Q9H4I2	956 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	MIOS	Q9NXC5	875 aa		3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	WSB2	Q9NYS7	404 aa	Predicted RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	SEC63	Q9UGP8	760 aa	Known RBP	3.04	□□□□□ -1.92
SLTM-223	ENST00000560532	SOS1	Q07889	1333 aa	Predicted RBP	3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	ZNF644	Q9H582	1327 aa	Predicted RBP	3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	LNP1	A1A4G5	178 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	PTGES3L	E9PB15	166 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	T	O15178	435 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	VILL	O15195	856 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	CSPG5	O95196	566 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	H1F0	P07305	194 aa	Known RBP	3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	CKMT2	P17540	419 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	TYMP	P19971	482 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	KCNJ10	P78508	379 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	RAB41	Q5JT25	222 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	KLC3	Q6P597	504 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	LINGO4	Q6UY18	593 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	CDC20B	Q86Y33	519 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	C11orf53	Q8IXP5	236 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	AGAP3	Q96P47	875 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	HRH4	Q9H3N8	390 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	SIX2	Q9NPC8	291 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	PTTG2	Q9NZH5	202 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	COQ3	Q9NZJ6	369 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	NPAP1	Q9NZP6	1156 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	SUCLA2	Q9P2R7	463 aa	Predicted RBP	3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	PNMA2	Q9UL42	364 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	PCDHGA5	Q9Y5G8	931 aa		3.03	□□□□□ -1.92
SLTM-223	ENST00000560532	ZNF541	Q9H0D2	1346 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	MAGEB17	A8MXT2	336 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	ZBED4	O75132	1171 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	CREG1	O75629	220 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	TPO	P07202	933 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	HMBS	P08397	361 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	FRMD6-AS1	P0C7T7	363 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	ACP2	P11117	423 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	ITGA3	P26006	1051 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	SHC1	P29353	583 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	PNLIPRP2	P54317	469 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	SNRPE	P62304	92 aa	Known RBP	3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	SNRPD1	P62314	119 aa	Known RBP	3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	PPARD	Q03181	441 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	RIG	Q13278	110 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	SIM2	Q14190	667 aa	Predicted RBP	3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	MELK	Q14680	651 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	DUSP28	Q4G0W2	176 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	PLEKHS1	Q5SXH7	462 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	GRTP1	Q5TC63	336 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	ADAL	Q6DHV7	355 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	PWWP2B	Q6NUJ5	590 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	ZNF613	Q6PF04	617 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	INTS8	Q75QN2	995 aa	Known RBP	3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	FASTKD5	Q7L8L6	764 aa	Known RBP	3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	SCML4	Q8N228	414 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	ZNF614	Q8N883	585 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	OLIG1	Q8TAK6	271 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	MRGPRD	Q8TDS7	321 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	DAZL	Q92904	295 aa	Known RBP	3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	ERLEC1	Q96DZ1	483 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	ABHD6	Q9BV23	337 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	SMARCAD1	Q9H4L7	1026 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	HHATL	Q9HCP6	504 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	PLCXD1	Q9NUJ7	323 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	ASIC3	Q9UHC3	531 aa		3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	PRRC2A	P48634	2157 aa	Known RBP	3.02	□□□□□ -1.93
SLTM-223	ENST00000560532	PRSS51	A0A1B0GVH4	220 aa		3.01	□□□□□ -1.93
SLTM-223	ENST00000560532	ELOVL7	A1L3X0	281 aa		3.01	□□□□□ -1.93
SLTM-223	ENST00000560532	OR2A25	A4D2G3	310 aa		3.01	□□□□□ -1.93
SLTM-223	ENST00000560532	PRR32	B1ATL7	298 aa		3.01	□□□□□ -1.93
SLTM-223	ENST00000560532	AP3D1	O14617	1153 aa		3.01	□□□□□ -1.93
SLTM-223	ENST00000560532	ZFAND5	O76080	213 aa		3.01	□□□□□ -1.93
SLTM-223	ENST00000560532	MOCS3	O95396	460 aa		3.01	□□□□□ -1.93
SLTM-223	ENST00000560532	CLPTM1	O96005	669 aa		3.01	□□□□□ -1.93
SLTM-223	ENST00000560532	HOXD13	P35453	343 aa		3.01	□□□□□ -1.93
SLTM-223	ENST00000560532	SLC15A1	P46059	708 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms