RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CSPG4P5Q96PW8 444 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF300Q96RE9 604 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TWNKQ96RR1 684 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 NODALQ96S42 347 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 VAT1Q99536 393 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 DHRS9Q9BPW9 319 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 BTBD2Q9BX70 525 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 HDAC8Q9BY41 377 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 NXF2Q9GZY0 626 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CLPBQ9H078 707 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 C2orf40Q9H1Z8 148 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 DSN1Q9H410 356 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 POMKQ9H5K3 350 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 IPPKQ9H8X2 491 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 C12orf10Q9HB07 376 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 PXMP2Q9NR77 195 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TLR9Q9NR96 1032 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 C1GALT1Q9NS00 363 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CATSPERZQ9NTU4 200 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 GTSE1Q9NYZ3 720 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CCDC59Q9P031 241 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CCDC167Q9P0B6 97 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC17A6Q9P2U8 582 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 XPR1Q9UBH6 696 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 WARS2Q9UGM6 360 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 FBXO40Q9UH90 709 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 OSGIN1Q9UJX0 560 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 VANGL2Q9ULK5 521 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 RUVBL2Q9Y230 463 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 AP3M1Q9Y2T2 418 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 DOCK1Q14185 1865 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ANKRD31Q8N7Z5 1873 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 A0A0J9YYE9 177 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 PNMA8CA0A1B0GUJ8 204 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 METTL15A6NJ78 407 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 LOC110117498-PIK3R3F6TDL0 507 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 H0YIN7 160 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC1A7O00341 560 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 IFRD1O00458 451 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 HAT1O14929 419 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC16A6O15403 523 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CA12O43570 354 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 DFNA5O60443 496 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FKTNO75072 461 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 DAB1O75553 588 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SOAT2O75908 522 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CNTN5O94779 1100 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TPPPO94811 219 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CKMP06732 381 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SYPP08247 313 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 FGF4P08620 206 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 HTR1AP08908 422 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RAP2AP10114 183 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 KCNA2P16389 499 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 STMN1P16949 149 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 PRKCAP17252 672 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 IL1RNP18510 177 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 PAMP19021 973 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CHRM3P20309 590 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CYP2B6P20813 491 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC6A2P23975 617 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RPL10P27635 214 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 PSMB4P28070 264 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 ELK4P28324 431 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RRM2P31350 389 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 BUD31P41223 144 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RPS5P46782 204 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RPL34P49207 117 aaKnown RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 GSK3BP49841 420 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC26A2P50443 739 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 HSPA2P54652 639 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 AIF1P55008 147 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TPD52P55327 224 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 P2RX3P56373 397 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF33AQ06730 810 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 LAPTM5Q13571 262 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 GALNT3Q14435 633 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC14A2Q15849 920 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 KYAT1Q16773 422 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CA9Q16790 459 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CYP51A1Q16850 503 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SHROOM1Q2M3G4 852 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TYSND1Q2T9J0 566 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 C15orf59Q2T9L4 293 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TBC1D10BQ4KMP7 808 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TOR1AIP1Q5JTV8 583 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 GJC2Q5T442 439 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 STRIP1Q5VSL9 837 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 AGAP9Q5VTM2 703 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF691Q5VV52 312 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 RSBN1Q5VWQ0 802 aaPredicted RBP5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 KCTD11Q693B1 232 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 NAPEPLDQ6IQ20 393 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SCYL2Q6P3W7 929 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CNSTQ6PJW8 725 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 ABHD15Q6UXT9 468 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 TMC5Q6UXY8 1006 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 SCARA5Q6ZMJ2 495 aa5.87□□□□□ -1.47
SNRPA1-209ENST00000560307 CBLL1Q75N03 491 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms