RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	RSC1A1	Q92681	617 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	KRT35	Q92764	455 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	C9orf72	Q96LT7	481 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	TCF12	Q99081	682 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	FAM118B	Q9BPY3	351 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	APOL2	Q9BQE5	337 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	STN1	Q9H668	368 aa	Known RBP	6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	GPN2	Q9H9Y4	310 aa	Predicted RBP	6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	ZNF71	Q9NQZ8	489 aa	Predicted RBP	6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	FBXO8	Q9NRD0	319 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	DDX56	Q9NY93	547 aa	Known RBP	6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	KLHL8	Q9P2G9	620 aa	Predicted RBP	6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	FAM153A	Q9UHL3	310 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	ADGRE2	Q9UHX3	823 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	PSMD13	Q9UNM6	376 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	KCTD3	Q9Y597	815 aa		6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	MRPS18B	Q9Y676	258 aa	Known RBP	6.86	□□□□□ -1.31
MARK3-215	ENST00000558787	hCG_1818297	A0A087WSY0	165 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	LILRA5	A6NI73	299 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	OR5K4	A6NMS3	321 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	BTNL10	A8MVZ5	291 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	POLR1C	O15160	346 aa	Predicted RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	PJA2	O43164	708 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	SUV39H1	O43463	412 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	VEGFD	O43915	354 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	POP7	O75817	140 aa	Known RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	RASSF9	O75901	435 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	ZRANB2	O95218	330 aa	Known RBP eCLIP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	C9	P02748	559 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	SLC2A4	P14672	509 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	XRCC1	P18887	633 aa	Predicted RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	IDS	P22304	550 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	MSN	P26038	577 aa	Known RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	RBL1	P28749	1068 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	OAS2	P29728	719 aa	Known RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	PBLD	P30039	288 aa	Predicted RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	ADM	P35318	185 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	NR2C2	P49116	596 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	CLCNKA	P51800	687 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	POLE2	P56282	527 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	TFDP2	Q14188	446 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	TCEAL1	Q15170	157 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	MSMP	Q1L6U9	139 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	DEFB109B	Q30KR1	87 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	PDPK2P	Q6A1A2	396 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	BORA	Q6PGQ7	559 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	TMEM220	Q6QAJ8	160 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	ABRAXAS1	Q6UWZ7	409 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	CEACAM20	Q6UY09	585 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	CERS6	Q6ZMG9	384 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	DET1	Q7L5Y6	550 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	VSIG1	Q86XK7	387 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	PLXDC1	Q8IUK5	500 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	NLGN4X	Q8N0W4	816 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	RNF10	Q8N5U6	811 aa	Known RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	GPR150	Q8NGU9	434 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	P3H4	Q92791	437 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	CXorf40B	Q96DE9	158 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	QKI	Q96PU8	341 aa	Known RBP eCLIP	6.85	□□□□□ -1.31	3e-8	■■■■■ 31.1
MARK3-215	ENST00000558787	OR6C1	Q96RD1	312 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	GORASP1	Q9BQQ3	440 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	DESI2	Q9BSY9	194 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	FICD	Q9BVA6	458 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	SLC40A1	Q9NP59	571 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	GEMIN8	Q9NWZ8	242 aa	Known RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	SIDT1	Q9NXL6	827 aa	Known RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	IL17C	Q9P0M4	197 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	FAM8A1	Q9UBU6	413 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	PYCARD	Q9ULZ3	195 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	REXO2	Q9Y3B8	237 aa	Known RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	ACTL7B	Q9Y614	415 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	ARL5A	Q9Y689	179 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	CFAP20	Q9Y6A4	193 aa	Known RBP	6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	DUSP10	Q9Y6W6	482 aa		6.85	□□□□□ -1.31
MARK3-215	ENST00000558787	MN1	Q10571	1320 aa	Predicted RBP	6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	NAV2	Q8IVL1	2488 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	IGHV5-51	A0A0C4DH38	117 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	GLYATL1P3	A0A0U1RQE8	302 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	OR2AG2	A6NM03	316 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	ZNF891	A8MT65	544 aa	Predicted RBP	6.84	□□□□□ -1.31
MARK3-215	ENST00000558787		H7C0C1	242 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	CCL22	O00626	93 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	GAPDHS	O14556	408 aa	Predicted RBP	6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	PSTPIP1	O43586	416 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	NDUFB5	O43674	189 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	KATNA1	O75449	491 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	KIAA0754	O94854	1291 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	EPO	P01588	193 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	HMGCL	P35914	325 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	SPAM1	P38567	509 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	ATP5O	P48047	213 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	KCNAB2	Q13303	367 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	GTF2H3	Q13889	308 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	NFE2L1	Q14494	772 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	SPARCL1	Q14515	664 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	KCNAB1	Q14722	419 aa		6.84	□□□□□ -1.31
MARK3-215	ENST00000558787	SLC1A5	Q15758	541 aa		6.84	□□□□□ -1.31

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