RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CPT1BQ92523 772 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 CDKN2AIPNLQ96HQ2 116 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 MRFAP1L1Q96HT8 127 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 DNAJC1Q96KC8 554 aaKnown RBP15.44■□□□□ 0.06
TUBB3-213ENST00000557262 TLR10Q9BXR5 811 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 CHST8Q9H2A9 424 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 TFB2MQ9H5Q4 396 aaKnown RBP15.44■□□□□ 0.06
TUBB3-213ENST00000557262 MVB12BQ9H7P6 319 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 VPS37BQ9H9H4 285 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 FANCEQ9HB96 536 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 NLE1Q9NVX2 485 aaPredicted RBP15.44■□□□□ 0.06
TUBB3-213ENST00000557262 AMFRQ9UKV5 643 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 REXO2Q9Y3B8 237 aaKnown RBP15.44■□□□□ 0.06
TUBB3-213ENST00000557262 RELNP78509 3460 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 FLNCQ14315 2725 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 GSAPA4D1B5 854 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 GRID2IPA4D2P6 1211 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 MEN1O00255 615 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 BTN3A3O00478 584 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 PSMD3O43242 534 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 PTMAP06454 111 aaKnown RBP15.43■□□□□ 0.06
TUBB3-213ENST00000557262 GSTM1P09488 218 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 RAB40ALP0C0E4 278 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 PDHA2P29803 388 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 ZNF75DP51815 510 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 VAV2P52735 878 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 GSTM4Q03013 218 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 LAMB3Q13751 1172 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 PLEKHS1Q5SXH7 462 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 PRAMEF17Q5VTA0 474 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 RAD9BQ6WBX8 426 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 FAM71DQ8N9W8 422 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 STYXQ8WUJ0 223 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 TFGQ92734 400 aaPredicted RBP15.43■□□□□ 0.06
TUBB3-213ENST00000557262 CLIP3Q96DZ5 547 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 TRIM55Q9BYV6 548 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 LRRC40Q9H9A6 602 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 SERTAD3Q9UJW9 196 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 PLAAQ9Y263 795 aa15.43■□□□□ 0.06
TUBB3-213ENST00000557262 DOPEY2Q9Y3R5 2298 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 BTN3A1O00481 513 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 DDX3YO15523 660 aaKnown RBP15.42■□□□□ 0.06
TUBB3-213ENST00000557262 DNAJB5O75953 348 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 AP2A2O94973 939 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 METTL18O95568 372 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 MSL3P1P0C860 447 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 PREPP48147 710 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 CCL11P51671 97 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 CACNG1Q06432 222 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 SRSF1Q07955 248 aaKnown RBP eCLIP15.42■□□□□ 0.06
TUBB3-213ENST00000557262 PEX26Q7Z412 305 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 AMIGO1Q86WK6 493 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 DSELQ8IZU8 1212 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 CLDN19Q8N6F1 224 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 UBL4BQ8N7F7 174 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 OR52E1Q8NGJ3 308 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 OR1L3Q8NH93 324 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 MIB2Q96AX9 1013 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 ALS2CR12Q96Q35 445 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 NLNQ9BYT8 704 aa15.42■□□□□ 0.06
TUBB3-213ENST00000557262 NAV2Q8IVL1 2488 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 C2orf74A8MZ97 194 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 MIF4GDA9UHW6 222 aaKnown RBP15.41■□□□□ 0.06
TUBB3-213ENST00000557262 TMEM150CB9EJG8 249 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 PDGFAP04085 211 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 PRSS56P0CW18 603 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 ST6GAL1P15907 406 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 CD97P48960 835 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 MLLT10P55197 1068 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 PRKG2Q13237 762 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 IL10RAQ13651 578 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 BOP1Q14137 746 aaKnown RBP15.41■□□□□ 0.06
TUBB3-213ENST00000557262 POU6F1Q14863 301 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 P3H1Q32P28 736 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 LCN10Q6JVE6 187 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 KIAA1328Q86T90 577 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 ATCAYQ86WG3 371 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 ADGRF3Q8IZF5 1079 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 SYCE1Q8N0S2 351 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 ACRBPQ8NEB7 543 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 TRAPPC9Q96Q05 1148 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 NRTNQ99748 197 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 SLC25A23Q9BV35 468 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 PITPNM3Q9BZ71 974 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 ING2Q9H160 280 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 ACTR5Q9H9F9 607 aaPredicted RBP15.41■□□□□ 0.06
TUBB3-213ENST00000557262 ACSS2Q9NR19 701 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 SMARCAL1Q9NZC9 954 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 ANKMY1Q9P2S6 941 aa15.41■□□□□ 0.06
TUBB3-213ENST00000557262 PCDHGA9Q9Y5G4 932 aaKnown RBP15.41■□□□□ 0.06
TUBB3-213ENST00000557262 CLEC18AA5D8T8 446 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 ARGFXA6NJG6 315 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 QSOX1O00391 747 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 LIN7AO14910 233 aaPredicted RBP15.4■□□□□ 0.06
TUBB3-213ENST00000557262 AP2A1O95782 977 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 CYP2A7P20853 494 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 PSMA3P25788 255 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 RORAP35398 523 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 NSG1P42857 185 aa15.4■□□□□ 0.06
TUBB3-213ENST00000557262 LMAN1P49257 510 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms