RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 FOXJ2Q9P0K8 574 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 SAMD15Q9P1V8 674 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 ASIC3Q9UHC3 531 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 COLEC10Q9Y6Z7 277 aa11.25□□□□□ -0.61
SLIRP-205ENST00000556310 OR5K3A6NET4 321 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 EFCAB7A8K855 629 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 PRMT5O14744 637 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 FANCGO15287 622 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 KLK10O43240 276 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 AVILO75366 819 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 VAPBO95292 243 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 S1PR4O95977 384 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 LIPCP11150 499 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 PAMP19021 973 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 PDHA2P29803 388 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 LEPRP48357 1165 aaKnown RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 UCNP55089 124 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 PLOD1Q02809 727 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 CLN3Q13286 438 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 BOP1Q14137 746 aaKnown RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 RNF187Q5TA31 235 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 RNASEH2BQ5TBB1 312 aaKnown RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 BROXQ5VW32 411 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 MRNIPQ6NTE8 343 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 IRGCQ6NXR0 463 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 CASC4Q6P4E1 433 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 CES3Q6UWW8 571 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 OOSP2Q86WS3 158 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 LRRC6Q86X45 466 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 ACVR1CQ8NER5 493 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 JPH3Q8WXH2 748 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 PMEPA1Q969W9 287 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 TEFMQ96QE5 360 aaKnown RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 CD180Q99467 661 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 TSSK1BQ9BXA7 367 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 ASPSCR1Q9BZE9 553 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 ZNF768Q9H5H4 540 aaKnown RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 MVB12BQ9H7P6 319 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 OCIAD1Q9NX40 245 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 SIDT1Q9NXL6 827 aaKnown RBP11.24□□□□□ -0.61
SLIRP-205ENST00000556310 SLC39A1Q9NY26 324 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 RNF14Q9UBS8 474 aa11.24□□□□□ -0.61
SLIRP-205ENST00000556310 FAM237BA0A1B0GVD1 139 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 SLC5A10A0PJK1 596 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 MAGEB16A2A368 324 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 SDR42E2A6NKP2 422 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 GOLGA8MH3BSY2 632 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 CCDC188H7C350 402 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 DNALI1O14645 258 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-205ENST00000556310 RASSF9O75901 435 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 OGNP20774 298 aaKnown RBP11.23□□□□□ -0.61
SLIRP-205ENST00000556310 RPS3P23396 243 aaKnown RBP eCLIP11.23□□□□□ -0.615e-12■■■■■ 28.9
SLIRP-205ENST00000556310 PAFAH1B1P43034 410 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 PTGIRP43119 386 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 ARCN1P48444 511 aaKnown RBP11.23□□□□□ -0.61
SLIRP-205ENST00000556310 MMP16P51512 607 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 TMPRSS3P57727 454 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 PPP1CAP62136 330 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 MC2RQ01718 297 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 KRT33BQ14525 404 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 TYSND1Q2T9J0 566 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 DCAF12Q5T6F0 453 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 FAM92BQ6ZTR7 304 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 SYDE1Q6ZW31 735 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-205ENST00000556310 LDB1Q86U70 411 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-205ENST00000556310 HOOK3Q86VS8 718 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 OTUD6BQ8N6M0 293 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 TFGQ92734 400 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-205ENST00000556310 ZNF669Q96BR6 464 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-205ENST00000556310 CRELD1Q96HD1 420 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 CARD6Q9BX69 1037 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 P2RY12Q9H244 342 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 SEMA5BQ9P283 1151 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 GNPTGQ9UJJ9 305 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 B3GALT1Q9Y5Z6 326 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 MGAQ8IWI9 3026 aa11.23□□□□□ -0.61
SLIRP-205ENST00000556310 TLCD2A6NGC4 264 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 STMND1H3BQB6 276 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 MATN2O00339 956 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 PFDN6O15212 129 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 KIF1CO43896 1103 aaKnown RBP11.22□□□□□ -0.61
SLIRP-205ENST00000556310 NDUFS3O75489 264 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 ACADLP28330 430 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 CCR7P32248 378 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 DR1Q01658 176 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 DHX34Q14147 1143 aaKnown RBP11.22□□□□□ -0.61
SLIRP-205ENST00000556310 BRD3Q15059 726 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 TMED2Q15363 201 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 ANKRD20A4Q4UJ75 823 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 DNTTIP2Q5QJE6 756 aaKnown RBP11.22□□□□□ -0.61
SLIRP-205ENST00000556310 CACHD1Q5VU97 1274 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 IZUMO3Q5VZ72 239 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 ANKS6Q68DC2 871 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 PTRHD1Q6GMV3 140 aaKnown RBP11.22□□□□□ -0.61
SLIRP-205ENST00000556310 CEACAM20Q6UY09 585 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 PCGF5Q86SE9 256 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 SDCCAG8Q86SQ7 713 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-205ENST00000556310 TMEM135Q86UB9 458 aa11.22□□□□□ -0.61
SLIRP-205ENST00000556310 ZFAND4Q86XD8 727 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms