RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ITGALP20701 1170 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 HMGCLP35914 325 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 PIK3CGP48736 1102 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 SLC11A1P49279 550 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 HTR6P50406 440 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 DGKQP52824 942 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 AP1S1P61966 158 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 RPL38P63173 70 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 TUBA3CQ13748 450 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 C16orf72Q14CZ0 275 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ABRAXAS2Q15018 415 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 MAPKAPK3Q16644 382 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 INO80DQ53TQ3 878 aaPredicted RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 RTP2Q5QGT7 225 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ARMC12Q5T9G4 340 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 LYPLAL1Q5VWZ2 237 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 TTC23Q5W5X9 447 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 TMEM214Q6NUQ4 689 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 NCEH1Q6PIU2 408 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 SBSNQ6UWP8 590 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 RSPO2Q6UXX9 243 aaPredicted RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 LINGO4Q6UY18 593 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 C16orf59Q7L2K0 433 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 C8orf59Q8N0T1 100 aaPredicted RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 SVOPLQ8N434 492 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 PDPRQ8NCN5 879 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 FIG4Q92562 907 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ABTB1Q969K4 478 aaPredicted RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 NCLNQ969V3 563 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 FAM162AQ96A26 154 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ULK4Q96C45 1275 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 AURKBQ96GD4 344 aaPredicted RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 MYO19Q96H55 970 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 CNDP2Q96KP4 475 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 RPL10LQ96L21 214 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 NSMCE3Q96MG7 304 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 SMIM14Q96QK8 99 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 HBEGFQ99075 208 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 DOK1Q99704 481 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 APOL5Q9BWW9 433 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 DPY30Q9C005 99 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 CIPCQ9C0C6 399 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ADNPQ9H2P0 1102 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 NSUN3Q9H649 340 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 GORASP2Q9H8Y8 452 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 MAGEE1Q9HCI5 957 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 HPS4Q9NQG7 708 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 MARCH5Q9NX47 278 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 WWOXQ9NZC7 414 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 DNAJB9Q9UBS3 223 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ZNHIT2Q9UHR6 403 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 USP22Q9UPT9 525 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 OARD1Q9Y530 152 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 PCDHGA11Q9Y5H2 935 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ORC6Q9Y5N6 252 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 SH3PXD2BA1X283 911 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 IQCF5A8MTL0 148 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ULK1O75385 1050 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 WDR47O94967 919 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 PRSS23O95084 383 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 SCELO95171 688 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 GUCA1CO95843 209 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 F11P03951 625 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ALPLP05186 524 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 PCNAP12004 261 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 RPS3P23396 243 aaKnown RBP eCLIP6.87□□□□□ -1.31
TDP1-213ENST00000555880 MAP4P27816 1152 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 HSPA7P48741 367 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 MMP16P51512 607 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 TMBIM6P55061 237 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ARF5P84085 180 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 CYP4F3Q08477 520 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 TRAF3Q13114 568 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 TTLL9Q3SXZ7 439 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ZIK1Q3SY52 487 aaPredicted RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 FAM174BQ3ZCQ3 159 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 RBM48Q5RL73 367 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 SULT1C3Q6IMI6 304 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 METTL2BQ6P1Q9 378 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 KLHL35Q6PF15 583 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 PRSS55Q6UWB4 352 aaPredicted RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 FAM151BQ6UXP7 276 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 LRRC8DQ7L1W4 858 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 LYSMD3Q7Z3D4 306 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 THAP5Q7Z6K1 395 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 SERPINA9Q86WD7 417 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 FAM9CQ8IZT9 166 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 ZBTB2Q8N680 514 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 HJURPQ8NCD3 748 aaPredicted RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 TTC16Q8NEE8 873 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 DNAJB8Q8NHS0 232 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 FBXO30Q8TB52 745 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 FNDC8Q8TC99 324 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 BORCS5Q969J3 196 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 SLC47A1Q96FL8 570 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 MUS81Q96NY9 551 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 CASD1Q96PB1 797 aa6.87□□□□□ -1.31
TDP1-213ENST00000555880 RBM4BQ9BQ04 359 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 USB1Q9BQ65 265 aaKnown RBP6.87□□□□□ -1.31
TDP1-213ENST00000555880 TMEM175Q9BSA9 504 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms