RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 F8W8V4 182 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 LIN7AO14910 233 aaPredicted RBP23.78■■□□□ 1.4
PRKCH-216ENST00000555542 GOT2P00505 430 aaKnown RBP23.78■■□□□ 1.4
PRKCH-216ENST00000555542 FGGP02679 453 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 OR56A5P0C7T3 313 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 ZSCAN5DPP0CG00 497 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 POLE2P56282 527 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 BASP1P80723 227 aaKnown RBP23.78■■□□□ 1.4
PRKCH-216ENST00000555542 PRKG2Q13237 762 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 BOP1Q14137 746 aaKnown RBP23.78■■□□□ 1.4
PRKCH-216ENST00000555542 PWWP2BQ6NUJ5 590 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 PACS1Q6VY07 963 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 CARFQ8N187 725 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 GLIS1Q8NBF1 620 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 TRIM58Q8NG06 486 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 OR13J1Q8NGT2 312 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 TFGQ92734 400 aaPredicted RBP23.78■■□□□ 1.4
PRKCH-216ENST00000555542 RANBP9Q96S59 729 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 FANCEQ9HB96 536 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 CASS4Q9NQ75 786 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 PADI1Q9ULC6 663 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 KALRNO60229 2985 aa23.78■■□□□ 1.4
PRKCH-216ENST00000555542 J3QKU1 62 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 MAP3K7O43318 606 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 TIAF1O95411 115 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 PSMA3P25788 255 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 RPL22P35268 128 aaKnown RBP23.77■■□□□ 1.4
PRKCH-216ENST00000555542 TUBB4BP68371 445 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 TUBB2AQ13885 445 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 GPR19Q15760 415 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 FASTKD1Q53R41 847 aaKnown RBP23.77■■□□□ 1.4
PRKCH-216ENST00000555542 FBXO38Q6PIJ6 1188 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 ZNF662Q6ZS27 426 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 NLRP9Q7RTR0 991 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 TMEM126BQ8IUX1 230 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 D2HGDHQ8N465 521 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 OR52E1Q8NGJ3 308 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 TUBB2BQ9BVA1 445 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 ADNPQ9H2P0 1102 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 GEMIN8Q9NWZ8 242 aaKnown RBP23.77■■□□□ 1.4
PRKCH-216ENST00000555542 ANAPC5Q9UJX4 755 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 KCND3Q9UK17 655 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 POMT2Q9UKY4 750 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 TCAF1Q9Y4C2 921 aa23.77■■□□□ 1.4
PRKCH-216ENST00000555542 GOLGA6L3A6NEY3 463 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 CEP104O60308 925 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 NTRK1P04629 796 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 OAS2P29728 719 aaKnown RBP23.76■■□□□ 1.39
PRKCH-216ENST00000555542 PPARGP37231 505 aaPredicted RBP23.76■■□□□ 1.39
PRKCH-216ENST00000555542 SIX1Q15475 284 aaPredicted RBP23.76■■□□□ 1.39
PRKCH-216ENST00000555542 DEFB109BQ30KR1 87 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 ZNF658BQ4V348 819 aaPredicted RBP23.76■■□□□ 1.39
PRKCH-216ENST00000555542 AMIGO1Q86WK6 493 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 OR4L1Q8NH43 312 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 PPM1MQ96MI6 270 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 FCRL4Q96PJ5 515 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 TLR10Q9BXR5 811 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 LHX9Q9NQ69 397 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 C1GALT1Q9NS00 363 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 RIMKLBQ9ULI2 386 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 ASF1AQ9Y294 204 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 ZKSCAN5Q9Y2L8 839 aa23.76■■□□□ 1.39
PRKCH-216ENST00000555542 SLC9B1P1A6NJY1 282 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 BTN3A1O00481 513 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 SCRG1O75711 98 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 F8A1P23610 371 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 SESN2P58004 480 aaPredicted RBP23.75■■□□□ 1.39
PRKCH-216ENST00000555542 KCNAB2Q13303 367 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 ATP1A1-AS1Q5TC04 95 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 DRICH1Q6PGQ1 229 aaPredicted RBP23.75■■□□□ 1.39
PRKCH-216ENST00000555542 C4orf22Q6V702 233 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 NAPRTQ6XQN6 538 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 HOOK3Q86VS8 718 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 ZNF778Q96MU6 729 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 TSSK1BQ9BXA7 367 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 SLC25A18Q9H1K4 315 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 TFB2MQ9H5Q4 396 aaKnown RBP23.75■■□□□ 1.39
PRKCH-216ENST00000555542 XKR8Q9H6D3 395 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 STARD5Q9NSY2 213 aa23.75■■□□□ 1.39
PRKCH-216ENST00000555542 DRG1Q9Y295 367 aaKnown RBP23.75■■□□□ 1.39
PRKCH-216ENST00000555542 C2orf74A8MZ97 194 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 BTN3A3O00478 584 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 OR1I1O60431 355 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 CPNE3O75131 537 aaKnown RBP23.74■■□□□ 1.39
PRKCH-216ENST00000555542 ITGB6P18564 788 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 PRDX3P30048 256 aaKnown RBP23.74■■□□□ 1.39
PRKCH-216ENST00000555542 CXCR5P32302 372 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 CSE1LP55060 971 aaKnown RBP23.74■■□□□ 1.39
PRKCH-216ENST00000555542 NFKB2Q00653 900 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 DNASE1L3Q13609 305 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 ERV3-1Q14264 604 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 OR5AR1Q8NGP9 310 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 OR8K5Q8NH50 307 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 CT55Q8WUE5 264 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 EIF2B3Q9NR50 452 aaKnown RBP23.74■■□□□ 1.39
PRKCH-216ENST00000555542 KCND1Q9NSA2 647 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 BTRCQ9Y297 605 aa23.74■■□□□ 1.39
PRKCH-216ENST00000555542 TDRKHQ9Y2W6 561 aaKnown RBP23.74■■□□□ 1.39
PRKCH-216ENST00000555542 CCZ1BP86790 482 aa23.73■■□□□ 1.39
PRKCH-216ENST00000555542 CCZ1P86791 482 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms