RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 STK38Q15208 465 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 ELOCQ15369 112 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FAM209BQ5JX69 171 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 RABGAP1LQ5R372 815 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FHL5Q5TD97 284 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FAXCQ5TGI0 409 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 PMF1Q6P1K2 205 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FAM173BQ6P4H8 233 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 MRGPREQ86SM8 312 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 LDLRAD3Q86YD5 345 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 LIX1LQ8IVB5 337 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FSTL5Q8N475 847 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 ARL10Q8N8L6 244 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 RNF152Q8N8N0 203 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 ATP6V0D2Q8N8Y2 350 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 ATP11CQ8NB49 1132 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FBXL13Q8NEE6 735 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 VPS37AQ8NEZ2 397 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 OR2A12Q8NGT7 310 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 C9orf43Q8TAL5 461 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 SEMA4DQ92854 862 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 MIB2Q96AX9 1013 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 USP28Q96RU2 1077 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 NEU1Q99519 415 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 KLF6Q99612 283 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 PRMT1Q99873 361 aaKnown RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 TRIM62Q9BVG3 475 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 TLR10Q9BXR5 811 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 TINAGL1Q9GZM7 467 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 CLPBQ9H078 707 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 ZNF71Q9NQZ8 489 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FOXJ2Q9P0K8 574 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 AKAP7Q9P0M2 348 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 APOBEC3BQ9UH17 382 aaKnown RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 XPO7Q9UIA9 1087 aaKnown RBP4.89□□□□□ -1.63
ATXN3-228ENST00000554592 VPS28Q9UK41 221 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 NAALADL1Q9UQQ1 740 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 TRAF3IP3Q9Y228 551 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 HS3ST2Q9Y278 367 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 OR51B4Q9Y5P0 310 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 FADS3Q9Y5Q0 445 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 DOPEY2Q9Y3R5 2298 aa4.89□□□□□ -1.63
ATXN3-228ENST00000554592 IGLON5A6NGN9 336 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 TMEM110-MUSTN1A8MSY1 372 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 AHRRA9YTQ3 701 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 POLR2DO15514 142 aaKnown RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 VPS4BO75351 444 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 CLDN11O75508 207 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 TRUB2O95900 331 aaKnown RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 PAEPP09466 180 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 ALPIP09923 528 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 TRIM49P0CI25 452 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 TRIM49CP0CI26 452 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 SRCP12931 536 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 ADRB3P13945 408 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 CTSEP14091 401 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 ITIH1P19827 911 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 MAKP20794 623 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 GCSHP23434 173 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 NR2F2P24468 414 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 ETV5P41161 510 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 NUMBP49757 651 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 RPS16P62249 146 aaKnown RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 NHLH2Q02577 135 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 PPARDQ03181 441 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 DPTQ07507 201 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 SLC20A2Q08357 652 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 KLRB1Q12918 225 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 MTA1Q13330 715 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 CUL2Q13617 745 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 NFIL3Q16649 462 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 TPRG1LQ5T0D9 272 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 FAM102AQ5T9C2 384 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 KLHDC7AQ5VTJ3 777 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 SYPL2Q5VXT5 272 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 HIBCHQ6NVY1 386 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 FBXL22Q6P050 247 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 GKN2Q86XP6 184 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 ULK2Q8IYT8 1036 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 RBFAQ8N0V3 343 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 Q8N9G6 341 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 PDPRQ8NCN5 879 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 LINC00301Q8NCQ3 95 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 KIAA0895Q8NCT3 520 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 ACRBPQ8NEB7 543 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 DENND6BQ8NEG7 585 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 KIAA1191Q96A73 305 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 RAB7BQ96AH8 199 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 CENPTQ96BT3 561 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 EEF2KMTQ96G04 330 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 RPRD1AQ96P16 312 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 LRRC61Q9BV99 259 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 EDEM3Q9BZQ6 932 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 MIS12Q9H081 205 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 TCEAL2Q9H3H9 227 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 ZSCAN16Q9H4T2 348 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 EXOC1Q9NV70 894 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 VSX1Q9NZR4 365 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-228ENST00000554592 IL36AQ9UHA7 158 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 APPL1Q9UKG1 709 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms