RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ACTL8Q9H568 366 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 XKR8Q9H6D3 395 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 POMT2Q9UKY4 750 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 BTRCQ9Y297 605 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 HEBP2Q9Y5Z4 205 aa12.97□□□□□ -0.33
CPSF6-204ENST00000547486 CYSRT1A8MQ03 144 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 C21orf140B9A014 251 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 ZNF189O75820 626 aaPredicted RBP12.96□□□□□ -0.33
CPSF6-204ENST00000547486 RECKO95980 971 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 TPBGLP0DKB5 382 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 CDH3P22223 829 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 CASRP41180 1078 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 GRIA1P42261 906 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 CD151P48509 253 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 BOP1Q14137 746 aaKnown RBP12.96□□□□□ -0.33
CPSF6-204ENST00000547486 IGFBP7Q16270 282 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 ZNF789Q5FWF6 425 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 NAPRTQ6XQN6 538 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 ZNF517Q6ZMY9 492 aaPredicted RBP12.96□□□□□ -0.33
CPSF6-204ENST00000547486 TMEM126BQ8IUX1 230 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 CARFQ8N187 725 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 OR52E1Q8NGJ3 308 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 TFGQ92734 400 aaPredicted RBP12.96□□□□□ -0.33
CPSF6-204ENST00000547486 LRRC45Q96CN5 670 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 GPR87Q9BY21 358 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 KLHL25Q9H0H3 589 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 TFB2MQ9H5Q4 396 aaKnown RBP12.96□□□□□ -0.33
CPSF6-204ENST00000547486 ETNK1Q9HBU6 452 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 C1GALT1Q9NS00 363 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 SOHLH2Q9NX45 425 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 SMARCAL1Q9NZC9 954 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 TLK1Q9UKI8 766 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 POLHQ9Y253 713 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 TP53TG5Q9Y2B4 290 aa12.96□□□□□ -0.33
CPSF6-204ENST00000547486 MYO18BQ8IUG5 2567 aa12.96□□□□□ -0.34
CPSF6-204ENST00000547486 SPTA1P02549 2419 aa12.96□□□□□ -0.34
CPSF6-204ENST00000547486 ZNF106Q9H2Y7 1883 aaKnown RBP12.95□□□□□ -0.34
CPSF6-204ENST00000547486 CCDC162PA2VCL2 907 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 GSAPA4D1B5 854 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 PSMD3O43242 534 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 LIASO43766 372 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 CPNE3O75131 537 aaKnown RBP12.95□□□□□ -0.34
CPSF6-204ENST00000547486 PDGFAP04085 211 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 ETS1P14921 441 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 PVRP15151 417 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 ST6GAL1P15907 406 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 PTPN4P29074 926 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 ABRQ12979 859 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 PRKAA1Q13131 559 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 RPA4Q13156 261 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 OASLQ15646 514 aaKnown RBP12.95□□□□□ -0.34
CPSF6-204ENST00000547486 P3H1Q32P28 736 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 LACTB2Q53H82 288 aaPredicted RBP12.95□□□□□ -0.34
CPSF6-204ENST00000547486 PLEKHS1Q5SXH7 462 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 TMTC4Q5T4D3 741 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 AMIGO1Q86WK6 493 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 ADGRF3Q8IZF5 1079 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 OR13J1Q8NGT2 312 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 OR8K5Q8NH50 307 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 OR1L3Q8NH93 324 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 ZNF778Q96MU6 729 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 TRAPPC9Q96Q05 1148 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 HGH1Q9BTY7 390 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 TRIM55Q9BYV6 548 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 PITPNM3Q9BZ71 974 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 CHST8Q9H2A9 424 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 MVB12BQ9H7P6 319 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 IMPACTQ9P2X3 320 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 SLC2A6Q9UGQ3 507 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 ANAPC2Q9UJX6 822 aa12.95□□□□□ -0.34
CPSF6-204ENST00000547486 FARSAQ9Y285 508 aaKnown RBP12.95□□□□□ -0.34
CPSF6-204ENST00000547486 BHMG1C9JSJ3 638 aaPredicted RBP12.94□□□□□ -0.34
CPSF6-204ENST00000547486 MEN1O00255 615 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 IFRD1O00458 451 aaPredicted RBP12.94□□□□□ -0.34
CPSF6-204ENST00000547486 OR1I1O60431 355 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 DNAJB5O75953 348 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 AP2A2O94973 939 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 MSNP26038 577 aaKnown RBP12.94□□□□□ -0.34
CPSF6-204ENST00000547486 ACADLP28330 430 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 STIP1P31948 543 aaKnown RBP12.94□□□□□ -0.34
CPSF6-204ENST00000547486 FOXN2P32314 431 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 NSG1P42857 185 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 LMAN1P49257 510 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 PMS2P54278 862 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 RPS15P62841 145 aaKnown RBP12.94□□□□□ -0.34
CPSF6-204ENST00000547486 SEMA5AQ13591 1074 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 IL10RAQ13651 578 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 BRD3Q15059 726 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 UGT8Q16880 541 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 FAM69BQ5VUD6 431 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 TCTN3Q6NUS6 607 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 RNF10Q8N5U6 811 aaKnown RBP12.94□□□□□ -0.34
CPSF6-204ENST00000547486 GLIS1Q8NBF1 620 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 OR5AR1Q8NGP9 310 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 C1orf54Q8WWF1 131 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 MR1Q95460 341 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 HDAC10Q969S8 669 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 VPS37BQ9H9H4 285 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 LATS2Q9NRM7 1088 aa12.94□□□□□ -0.34
CPSF6-204ENST00000547486 ICKQ9UPZ9 632 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms