RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 MBOAT4Q96T53 435 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 DGCR6LQ9BY27 220 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 FAM118AQ9NWS6 357 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 PKP3Q9Y446 797 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 ANGPTL3Q9Y5C1 460 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 CORINQ9Y5Q5 1042 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 BOLA2-SMG1P6H3BVE0 249 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 CPNE6O95741 557 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 OTCP00480 354 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 S100BP04271 92 aaPredicted RBP15.51■□□□□ 0.07
LDLR-204ENST00000545707 GSNP06396 782 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
LDLR-204ENST00000545707 CCNA2P20248 432 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 JAK1P23458 1154 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 CRHBPP24387 322 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 C21orf59P57076 290 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 CYP4F3Q08477 520 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 LDLRAP1Q5SW96 308 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 BROXQ5VW32 411 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 NCEH1Q6PIU2 408 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 GCNT7Q6ZNI0 430 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 CARNMT1Q8N4J0 409 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 ZNF548Q8NEK5 533 aaPredicted RBP15.51■□□□□ 0.07
LDLR-204ENST00000545707 LZICQ8WZA0 190 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 SLC47A1Q96FL8 570 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 PLEKHA8Q96JA3 519 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 YTHDF1Q9BYJ9 559 aaKnown RBP15.51■□□□□ 0.07
LDLR-204ENST00000545707 ABCG8Q9H221 673 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 GBF1Q92538 1859 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 PTGES3LE9PB15 166 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 AXIN1O15169 862 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 MAN1A2O60476 641 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 SEC22BO75396 215 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 SLC25A14O95258 325 aaPredicted RBP15.51■□□□□ 0.07
LDLR-204ENST00000545707 HTR1AP08908 422 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 INHBBP09529 407 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 CACNG1Q06432 222 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 SUSD1Q6UWL2 747 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 ADAMTSL2Q86TH1 951 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 C8orf59Q8N0T1 100 aaPredicted RBP15.51■□□□□ 0.07
LDLR-204ENST00000545707 LEMD2Q8NC56 503 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 BCL7CQ8WUZ0 217 aaPredicted RBP15.51■□□□□ 0.07
LDLR-204ENST00000545707 FAM162AQ96A26 154 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 DPY30Q9C005 99 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 ACTR8Q9H981 624 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 FAIMQ9NVQ4 179 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 AASSQ9UDR5 926 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 DOLKQ9UPQ8 538 aa15.51■□□□□ 0.07
LDLR-204ENST00000545707 C2orf78A6NCI8 922 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 ZNF840PA6NDX5 716 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 NOL3O60936 208 aaKnown RBP15.5■□□□□ 0.07
LDLR-204ENST00000545707 XYLBO75191 536 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 PRAMEF1O95521 474 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 KCNAB2Q13303 367 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 LAPTM4AQ15012 233 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 ZNF829Q3KNS6 432 aaPredicted RBP15.5■□□□□ 0.07
LDLR-204ENST00000545707 NECAB2Q7Z6G3 386 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 ZNF554Q86TJ5 538 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 SPARTQ8N0X7 666 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 SLC15A4Q8N697 577 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 PAF1Q8N7H5 531 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 NCLNQ969V3 563 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 CLPBQ9H078 707 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 TBC1D23Q9NUY8 699 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 LHX3Q9UBR4 397 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 WARS2Q9UGM6 360 aaKnown RBP15.5■□□□□ 0.07
LDLR-204ENST00000545707 ZNF490Q9ULM2 529 aaPredicted RBP15.5■□□□□ 0.07
LDLR-204ENST00000545707 TNPO3Q9Y5L0 923 aaKnown RBP15.5■□□□□ 0.07
LDLR-204ENST00000545707 DGKBQ9Y6T7 804 aa15.5■□□□□ 0.07
LDLR-204ENST00000545707 A0A1B0GVM2 712 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 LOC730098B7Z3J9 87 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 CXCR6O00574 342 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 RAD51BO15315 384 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 SEC14L2O76054 403 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 C1QCP02747 245 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 PLA2G16P53816 162 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 RHOAP61586 193 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 GRSF1Q12849 480 aaKnown RBP eCLIP15.49■□□□□ 0.07
LDLR-204ENST00000545707 HECTD3Q5T447 861 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 ACBD5Q5T8D3 534 aaPredicted RBP15.49■□□□□ 0.07
LDLR-204ENST00000545707 C16orf87Q6PH81 154 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 ANKRD46Q86W74 232 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 SLC22A15Q8IZD6 547 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 RGL4Q8IZJ4 473 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 CHDHQ8NE62 594 aaPredicted RBP15.49■□□□□ 0.07
LDLR-204ENST00000545707 OR8J3Q8NGG0 315 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 SDCCAG3Q96C92 435 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 UGT2B28Q9BY64 529 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 ASB8Q9H765 288 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 WWOXQ9NZC7 414 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 INVSQ9Y283 1065 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 C1orf232A0A0U1RR37 186 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 ELOVL7A1L3X0 281 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 DYTNA2CJ06 578 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 H7C0S8 307 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 GAPDHSO14556 408 aaPredicted RBP15.49■□□□□ 0.07
LDLR-204ENST00000545707 AREL1O15033 823 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 HS6ST1O60243 411 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 TBC1D4O60343 1298 aa15.49■□□□□ 0.07
LDLR-204ENST00000545707 ABCB7O75027 752 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms