RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PHC3Q8NDX5 983 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 KLHL6Q8WZ60 621 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 PMEPA1Q969W9 287 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 CRELD1Q96HD1 420 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 PANX3Q96QZ0 392 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 TCF12Q99081 682 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 CTRCQ99895 268 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 TRIT1Q9H3H1 467 aaKnown RBP15.31■□□□□ 0.04
CCDC78-216ENST00000544996 TFB2MQ9H5Q4 396 aaKnown RBP15.31■□□□□ 0.04
CCDC78-216ENST00000544996 PRORYQ9H606 182 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 KCND1Q9NSA2 647 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 POLG2Q9UHN1 485 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 ASF1AQ9Y294 204 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 VPS9D1Q9Y2B5 631 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 SSUH2Q9Y2M2 353 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 MAD1L1Q9Y6D9 718 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 RPS6KL1Q9Y6S9 549 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 KIF26BQ2KJY2 2108 aa15.31■□□□□ 0.04
CCDC78-216ENST00000544996 CELSR3Q9NYQ7 3312 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 TLCD2A6NGC4 264 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 GOLGA8KD6RF30 607 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 GOLGA8TH3BQL2 631 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 CCDC188H7C350 402 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 MATN2O00339 956 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 KPNA5O15131 536 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 KDM1AO60341 852 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 NELFEP18615 380 aaKnown RBP15.3■□□□□ 0.04
CCDC78-216ENST00000544996 RPS3P23396 243 aaKnown RBP eCLIP15.3■□□□□ 0.04
CCDC78-216ENST00000544996 PPP1CAP62136 330 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 DR1Q01658 176 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 VAC14Q08AM6 782 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 PRKG2Q13237 762 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 IL11RAQ14626 422 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 TGIF1Q15583 401 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 ANKRD20A4Q4UJ75 823 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 MANEAQ5SRI9 462 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 NEPROQ6NW34 567 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 NAPRTQ6XQN6 538 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 CCDC81Q6ZN84 652 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 GPR155Q7Z3F1 870 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 DTX1Q86Y01 620 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 KMT5CQ86Y97 462 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 TBC1D21Q8IYX1 336 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 OR52E1Q8NGJ3 308 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 GSDMBQ8TAX9 411 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 ZNF669Q96BR6 464 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-216ENST00000544996 HGH1Q9BTY7 390 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 CPNE5Q9HCH3 593 aa15.3■□□□□ 0.04
CCDC78-216ENST00000544996 IGHV5-51A0A0C4DH38 117 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 IQCF5A8MTL0 148 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 BHMG1C9JSJ3 638 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 H3BMM5 538 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 DNALI1O14645 258 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 RPN2P04844 631 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 POLR2CP19387 275 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 OGNP20774 298 aaKnown RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 ACADLP28330 430 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 CCR7P32248 378 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 MAGEA3P43357 314 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 ARCN1P48444 511 aaKnown RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 CSE1LP55060 971 aaKnown RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 EIF3BP55884 814 aaKnown RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 HSD11B2P80365 405 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 THOC5Q13769 683 aaKnown RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 TYSND1Q2T9J0 566 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 DNAJC21Q5F1R6 531 aaKnown RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 RNASEH2BQ5TBB1 312 aaKnown RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 TMEM135Q86UB9 458 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 HOOK3Q86VS8 718 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 AMIGO1Q86WK6 493 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 SLC22A15Q8IZD6 547 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 CARFQ8N187 725 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 IL22RA1Q8N6P7 574 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 SIDT2Q8NBJ9 832 aaKnown RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 OR6C1Q96RD1 312 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 MAP3K3Q99759 626 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 P2RY12Q9H244 342 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 SIDT1Q9NXL6 827 aaKnown RBP15.29■□□□□ 0.04
CCDC78-216ENST00000544996 SEMA5BQ9P283 1151 aa15.29■□□□□ 0.04
CCDC78-216ENST00000544996 ADAMTS20P59510 1910 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 TEX51A0A1B0GUA7 166 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 GSAPA4D1B5 854 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 MAP3K7O43318 606 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 AOAHP28039 575 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 PTGIRP43119 386 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 SH3BP2P78314 561 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 TMTC4Q5T4D3 741 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 ARHGAP40Q5TG30 622 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 IZUMO3Q5VZ72 239 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 OTOAQ7RTW8 1153 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 CILP2Q8IUL8 1156 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 KRT222Q8N1A0 295 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 ZSCAN1Q8NBB4 408 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 OR5AR1Q8NGP9 310 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 OR5K2Q8NHB8 316 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 STAMBPL1Q96FJ0 436 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 SLC41A2Q96JW4 573 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 SIGLEC10Q96LC7 697 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 APMAPQ9HDC9 416 aa15.28■□□□□ 0.04
CCDC78-216ENST00000544996 PDE7BQ9NP56 450 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms