RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 GPR33Q49SQ1 333 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 SPANXN3Q5MJ09 141 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 LDLRAP1Q5SW96 308 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 ANKS6Q68DC2 871 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 ADGRG6Q86SQ4 1221 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 SERPINA9Q86WD7 417 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 FAM129CQ86XR2 697 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 NXPE1Q8N323 547 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 OTUD6BQ8N6M0 293 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
ACTN1-206ENST00000544964 PYROXD1Q8WU10 500 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 UBXN4Q92575 508 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 ULK4Q96C45 1275 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 FMO2Q99518 471 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 ARHGAP9Q9BRR9 750 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 NAT9Q9BTE0 207 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 FAM129AQ9BZQ8 928 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 SPRY4Q9C004 299 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 OR2AG1Q9H205 316 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 TRIM39Q9HCM9 518 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 SARS2Q9NP81 518 aaKnown RBP12.22□□□□□ -0.45
ACTN1-206ENST00000544964 CATSPERZQ9NTU4 200 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 SMOXQ9NWM0 555 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 ATXN10Q9UBB4 475 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 KCNK6Q9Y257 313 aa12.22□□□□□ -0.45
ACTN1-206ENST00000544964 SPTAN1Q13813 2472 aaKnown RBP12.21□□□□□ -0.45
ACTN1-206ENST00000544964 USP9XQ93008 2570 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-206ENST00000544964 TRBV23OR9-2A0A075B6M9 112 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 EFCAB7A8K855 629 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 TTC4O95801 387 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 ERVK-10P10266 1014 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 ACP5P13686 325 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 ZNF8P17098 575 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-206ENST00000544964 MSH3P20585 1137 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 ACRV1P26436 265 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 SSTR1P30872 391 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 AKT1P31749 480 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 CSTF2P33240 577 aaKnown RBP eCLIP12.21□□□□□ -0.45
ACTN1-206ENST00000544964 RAB15P59190 212 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 TUBB4BP68371 445 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 DBN1Q16643 649 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 LONRF1Q17RB8 773 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 STEAP4Q687X5 459 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 IYDQ6PHW0 289 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 WDR74Q6RFH5 385 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-206ENST00000544964 DET1Q7L5Y6 550 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 CHST15Q7LFX5 561 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-206ENST00000544964 ARHGAP22Q7Z5H3 698 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 KCNMB4Q86W47 210 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 PALM2Q8IXS6 379 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 ZSCAN1Q8NBB4 408 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 DDHD1Q8NEL9 900 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 OR10G6Q8NH81 332 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 SLC38A3Q99624 504 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 FAM117AQ9C073 453 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 PHACTR1Q9C0D0 580 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 GEMIN8Q9NWZ8 242 aaKnown RBP12.21□□□□□ -0.45
ACTN1-206ENST00000544964 SLC39A1Q9NY26 324 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 ZNHIT2Q9UHR6 403 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 PILRAQ9UKJ1 303 aa12.21□□□□□ -0.45
ACTN1-206ENST00000544964 MN1Q10571 1320 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-206ENST00000544964 SUV39H1O43463 412 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 RAD1O60671 282 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 CDK14O94921 469 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 FAM153BP0C7A2 387 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 MYBL2P10244 700 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 F3P13726 295 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 EPHA4P54764 986 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 GPX6P59796 221 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 UBE2IP63279 158 aaKnown RBP12.2□□□□□ -0.46
ACTN1-206ENST00000544964 TMEM115Q12893 351 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-206ENST00000544964 THOC5Q13769 683 aaKnown RBP12.2□□□□□ -0.46
ACTN1-206ENST00000544964 NAA30Q147X3 362 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-206ENST00000544964 FAM153CQ494X1 144 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 HSP90AA5PQ58FG0 334 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 NEPROQ6NW34 567 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 TRMT10BQ6PF06 316 aaKnown RBP12.2□□□□□ -0.46
ACTN1-206ENST00000544964 CRTC3Q6UUV7 619 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 CACNA2D3Q8IZS8 1091 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 IL22RA1Q8N6P7 574 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 RASGEF1AQ8N9B8 481 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 GSDMBQ8TAX9 411 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.2□□□□□ -0.46
ACTN1-206ENST00000544964 CERS2Q96G23 380 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 DCUN1D1Q96GG9 259 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 TTC25Q96NG3 672 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 COPS8Q99627 209 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 ZMYND15Q9H091 742 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 APMAPQ9HDC9 416 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 IARS2Q9NSE4 1012 aaKnown RBP12.2□□□□□ -0.46
ACTN1-206ENST00000544964 ZDHHC3Q9NYG2 299 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 SLC17A6Q9P2U8 582 aa12.2□□□□□ -0.46
ACTN1-206ENST00000544964 HEMK1Q9Y5R4 338 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-206ENST00000544964 PRR19A6NJB7 356 aa12.19□□□□□ -0.46
ACTN1-206ENST00000544964 OR2AG2A6NM03 316 aa12.19□□□□□ -0.46
ACTN1-206ENST00000544964 VEGFDO43915 354 aa12.19□□□□□ -0.46
ACTN1-206ENST00000544964 NUAK1O60285 661 aa12.19□□□□□ -0.46
ACTN1-206ENST00000544964 OR1I1O60431 355 aa12.19□□□□□ -0.46
ACTN1-206ENST00000544964 CSRP3P50461 194 aa12.19□□□□□ -0.46
ACTN1-206ENST00000544964 CTSCP53634 463 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms