RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 NEMP2A6NFY4 417 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 PRR19A6NJB7 356 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 PDZK1P1A8MUH7 402 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 GFYI3L273 518 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 IFRD1O00458 451 aaPredicted RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 SNX2O60749 519 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 TRIM13O60858 407 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 PSIP1O75475 530 aaKnown RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 CATP04040 527 aaKnown RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 ENO2P09104 434 aaPredicted RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 HIST1H2AGP0C0S8 130 aaPredicted RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 CTSEP14091 401 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 GFAPP14136 432 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 JUNDP17535 347 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 HIST1H2ADP20671 130 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 CYP2A7P20853 494 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 BGNP21810 368 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 RPL10P27635 214 aaKnown RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 MAP4P27816 1152 aaKnown RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 CLCNKAP51800 687 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 NXPH1P58417 271 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 GNGT1P63211 74 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 CTBSQ01459 385 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 ASPHQ12797 758 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 ILF3Q12906 894 aaKnown RBP eCLIP10.43□□□□□ -0.74
DDB1-221ENST00000543162 SIM2Q14190 667 aaPredicted RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 TCEA2Q15560 299 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 TGFBIQ15582 683 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 PDK4Q16654 411 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 PHKG1Q16816 387 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 PPP1R3AQ16821 1122 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 TUBB8Q3ZCM7 444 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 RAB44Q7Z6P3 723 aaPredicted RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 SPATS2Q86XZ4 545 aaKnown RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 SLC22A9Q8IVM8 553 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 FBXO39Q8N4B4 442 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 ZBTB44Q8NCP5 570 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 MCOLN3Q8TDD5 553 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 LRRC8CQ8TDW0 803 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 DLG3Q92796 817 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 ZC3H10Q96K80 434 aaKnown RBP10.43□□□□□ -0.74
DDB1-221ENST00000543162 HIST1H2AHQ96KK5 128 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 MAGEB18Q96M61 343 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 HIST1H2AJQ99878 128 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 H2AFJQ9BTM1 129 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 SLC12A9Q9BXP2 914 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 WWP1Q9H0M0 922 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 RDH14Q9HBH5 336 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 PARVBQ9HBI1 364 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 C11orf16Q9NQ32 467 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 OXSMQ9NWU1 459 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 NUDT4Q9NZJ9 180 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 SIRPGQ9P1W8 387 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 SUSD2Q9UGT4 822 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 PDE10AQ9Y233 779 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 PCDHGA2Q9Y5H1 932 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 SDK1Q7Z5N4 2213 aa10.43□□□□□ -0.74
DDB1-221ENST00000543162 ANKRD12Q6UB98 2062 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 NCF1BA6NI72 391 aaPredicted RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 A8MT66 165 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 NCF1CA8MVU1 366 aaPredicted RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 ARHGEF33A8MVX0 844 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 PRR33A8MZF0 331 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 FFAR2O15552 330 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 GALR2O43603 387 aaPredicted RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 H2AFYO75367 372 aaKnown RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 IPO13O94829 963 aaKnown RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 GUCA1CO95843 209 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 CSF2P04141 144 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 RPN2P04844 631 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 MTHFD2P13995 350 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 NCF1P14598 390 aaPredicted RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 AK4P27144 223 aaPredicted RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 ACADLP28330 430 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 ACTR1BP42025 376 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 HALP42357 657 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 RPIAP49247 311 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 NUBP1P53384 320 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 PRKAA2P54646 552 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 DNAJB13P59910 316 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 ACTR1AP61163 376 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 NFKB2Q00653 900 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 CHI3L2Q15782 390 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 PFKFB4Q16877 469 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 LIPMQ5VYY2 423 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 TTC23LQ6PF05 361 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 SLC30A9Q6PML9 568 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 UNC5DQ6UXZ4 953 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 PRR23BQ6ZRT6 265 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 RASGRP3Q8IV61 690 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 PTGR2Q8N8N7 351 aaPredicted RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 CCL4L1Q8NHW4 92 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 RAB3IL1Q8TBN0 382 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 GPBAR1Q8TDU6 330 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 PIGKQ92643 395 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 ZNF75CPQ92670 426 aaPredicted RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 TFGQ92734 400 aaPredicted RBP10.42□□□□□ -0.74
DDB1-221ENST00000543162 PHF21BQ96EK2 531 aa10.42□□□□□ -0.74
DDB1-221ENST00000543162 RMDN2Q96LZ7 410 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms