RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CCNYL2	Q5T2Q4	361 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	KCTD11	Q693B1	232 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SYCE2	Q6PIF2	218 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CRTC3	Q6UUV7	619 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	R3HCC1L	Q7Z5L2	792 aa	Known RBP	5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	RGL4	Q8IZJ4	473 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	ZFP90	Q8TF47	636 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	HDAC11	Q96DB2	347 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	C1orf74	Q96LT6	269 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	NPY6R	Q99463	290 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	FICD	Q9BVA6	458 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	IGSF5	Q9NSI5	407 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	ATAD3A	Q9NVI7	634 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	PSME2	Q9UL46	239 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	EDDM13	A0A1B0GTR0	161 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783		E9PAM4	449 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	KPNA4	O00629	521 aa	Predicted RBP	5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	BCAS1	O75363	584 aa	Predicted RBP	5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	STC2	O76061	302 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	KAT7	O95251	611 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	EPHX1	P07099	455 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	GFAP	P14136	432 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SLC6A2	P23975	617 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	VIPR2	P41587	438 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	HLCS	P50747	726 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TPTE	P56180	551 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	ELP6	Q0PNE2	266 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	MEP1A	Q16819	746 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	PAGE2B	Q5JRK9	111 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TMTC4	Q5T4D3	741 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	ZNF776	Q68DI1	518 aa	Predicted RBP	5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	FAM45BP	Q6NSW5	357 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	STK32C	Q86UX6	486 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	PIM3	Q86V86	326 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	HS3ST5	Q8IZT8	346 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CLEC4F	Q8N1N0	589 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	OR52K2	Q8NGK3	314 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	FAM45A	Q8TCE6	357 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TUBGCP3	Q96CW5	907 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	C19orf60	Q96EN9	201 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SH3YL1	Q96HL8	342 aa	Predicted RBP	5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CCDC138	Q96M89	665 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	NSUN5	Q96P11	429 aa	Known RBP	5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	MIR1-1HG	Q9H1L0	117 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	GBA3	Q9H227	469 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	AASS	Q9UDR5	926 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	FBXO5	Q9UKT4	447 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SCML1	Q9UN30	329 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	NDUFAF1	Q9Y375	327 aa		5.58	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	ZNF487	B1APH4	448 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	FXYD1	O00168	92 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	PIP5K1B	O14986	540 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	LINC01565	O15544	149 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	NDUFB5	O43674	189 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	NOBOX	O60393	691 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	GMNN	O75496	209 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	MYO1D	O94832	1006 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	INMT	O95050	263 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	LDLR	P01130	860 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SRPRA	P08240	638 aa	Known RBP	5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TCF3	P15923	654 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	AGXT	P21549	392 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TCEA1	P23193	301 aa	Known RBP	5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TTK	P33981	857 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	GSK3B	P49841	420 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	HK2	P52789	917 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	PRKAA2	P54646	552 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	LIPE	Q05469	1076 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	DMPK	Q09013	629 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	NFYC	Q13952	458 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	ACAP2	Q15057	778 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	ZNF284	Q2VY69	593 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	MS4A13	Q5J8X5	152 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	RAB41	Q5JT25	222 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TMEM236	Q5W0B7	351 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	XAF1	Q6GPH4	301 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	NAPEPLD	Q6IQ20	393 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	PKN3	Q6P5Z2	889 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SLC36A4	Q6YBV0	504 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	LIMS2	Q7Z4I7	341 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SPRED1	Q7Z699	444 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SFRP1	Q8N474	314 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	AFAP1L2	Q8N4X5	818 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TTC9B	Q8N6N2	239 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	RTL3	Q8N8U3	475 aa	Known RBP	5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	PSD4	Q8NDX1	1056 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SDCCAG3	Q96C92	435 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	LRRC58	Q96CX6	371 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	DUS3L	Q96G46	650 aa	Known RBP	5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	TEX37	Q96LM6	180 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	ZNF599	Q96NL3	588 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	IL12RB2	Q99665	862 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SLC30A3	Q99726	388 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	FUNDC2	Q9BWH2	189 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	CHID1	Q9BWS9	393 aa		5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	KLF16	Q9BXK1	252 aa	Predicted RBP	5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	POLR1E	Q9GZS1	481 aa	Known RBP	5.57	□□□□□ -1.52
RAPGEF4-215	ENST00000540783	SMURF2	Q9HAU4	748 aa		5.57	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms