RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 H3BMQ9 156 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 TMEM189-UBE2V1I3L0A0 370 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 HS6ST1O60243 411 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 XYLBO75191 536 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 GLUD1P00367 558 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 ZDHHC11BP0C7U3 371 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 FSHRP23945 695 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 ALDH4A1P30038 563 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 ARSFP54793 590 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 EMX2Q04743 252 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 BFSP2Q13515 415 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 BOP1Q14137 746 aaKnown RBP13.41□□□□□ -0.26
BNIP3-202ENST00000540159 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.41□□□□□ -0.26
BNIP3-202ENST00000540159 GPR180Q86V85 440 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 ERI1Q8IV48 349 aaKnown RBP13.41□□□□□ -0.26
BNIP3-202ENST00000540159 ZC3H7AQ8IWR0 971 aaKnown RBP13.41□□□□□ -0.26
BNIP3-202ENST00000540159 TBC1D21Q8IYX1 336 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 RGL4Q8IZJ4 473 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 MFSD2AQ8NA29 543 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 DUS3LQ96G46 650 aaKnown RBP13.41□□□□□ -0.26
BNIP3-202ENST00000540159 MYO19Q96H55 970 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 COG8Q96MW5 612 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 ZNF382Q96SR6 550 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 BDH2Q9BUT1 245 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 BRINP2Q9C0B6 783 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■■□□ 17.4
BNIP3-202ENST00000540159 TOR3AQ9H497 397 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 OPTCQ9UBM4 332 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 LHX3Q9UBR4 397 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 PHF24Q9UPV7 400 aa13.41□□□□□ -0.26
BNIP3-202ENST00000540159 ILVBLA1L0T0 632 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 PFDN6O15212 129 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 HMGA1P17096 107 aaKnown RBP13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ITPKAP23677 461 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 TACR1P25103 407 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 PTGER3P43115 390 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 CTSOP43234 321 aaPredicted RBP13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ZSWIM9Q86XI8 627 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 LMNTD1Q8N9Z9 388 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 RAET1EQ8TD07 263 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 SLC13A3Q8WWT9 602 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ZNF583Q96ND8 569 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 OR52E6Q96RD3 313 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 INPP5KQ9BT40 448 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ATG10Q9H0Y0 220 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 PKD2L2Q9NZM6 624 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 MYO15AQ9UKN7 3530 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ANKRD33BA6NCL7 494 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ULK1O75385 1050 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ESR1P03372 595 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ENO2P09104 434 aaPredicted RBP13.4□□□□□ -0.26
BNIP3-202ENST00000540159 HOXB8P17481 243 aaPredicted RBP13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 NCEH1Q6PIU2 408 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 TXNDC11Q6PKC3 985 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 HM13Q8TCT9 377 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 BBS2Q9BXC9 721 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ACTR8Q9H981 624 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 SLC25A37Q9NYZ2 338 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 DLGAP4Q9Y2H0 992 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 DHRS7Q9Y394 339 aa13.4□□□□□ -0.26
BNIP3-202ENST00000540159 ARIH1Q9Y4X5 557 aaPredicted RBP13.4□□□□□ -0.26
BNIP3-202ENST00000540159 COL4A4P53420 1690 aaPredicted RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 FAM155AB1AL88 458 aaPredicted RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 TOR1BO14657 336 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 RAD51BO15315 384 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 MITFO75030 526 aaPredicted RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 VPS4BO75351 444 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 ZNF682O95780 498 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 ANXA6P08133 673 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 MAP4P27816 1152 aaKnown RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 HNF1BP35680 557 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 TSTA3Q13630 321 aaPredicted RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 GTF2H3Q13889 308 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 AASDHQ4L235 1098 aaPredicted RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 ZNF648Q5T619 568 aaPredicted RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 DUS1LQ6P1R4 473 aaKnown RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 R3HCC1LQ7Z5L2 792 aaKnown RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 SPRED1Q7Z699 444 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 TMEM179BQ7Z7N9 219 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 PATL1Q86TB9 770 aaKnown RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 ZDHHC13Q8IUH4 622 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 SNX29P2Q8IUI4 249 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 TANC1Q9C0D5 1861 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 PRDM8Q9NQV8 689 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 PCDHGA11Q9Y5H2 935 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 MYO1GB0I1T2 1018 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 H0Y858 1186 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 XPNPEP2O43895 674 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 CKMP06732 381 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 CACNG1Q06432 222 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 VAC14Q08AM6 782 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 ATP1A4Q13733 1029 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 ADRM1Q16186 407 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 ZBED5Q49AG3 693 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 PDCD4Q53EL6 469 aaKnown RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 FAM26DQ5JW98 314 aa13.39□□□□□ -0.27
BNIP3-202ENST00000540159 BEND7Q8N7W2 519 aaPredicted RBP13.39□□□□□ -0.27
BNIP3-202ENST00000540159 ST13P5Q8NFI4 369 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms