RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CDK9P50750 372 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TCEA2Q15560 299 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 KIAA0930Q6ICG6 404 aaPredicted RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 ERAP2Q6P179 960 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 PIM3Q86V86 326 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TRAPPC5Q8IUR0 188 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 UXS1Q8NBZ7 420 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 PHF10Q8WUB8 498 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 ZNF419Q96HQ0 510 aaPredicted RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 GPATCH1Q9BRR8 931 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 EMILIN2Q9BXX0 1053 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 ATG10Q9H0Y0 220 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 SOX17Q9H6I2 414 aaPredicted RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 ZDHHC6Q9H6R6 413 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 PDP1Q9P0J1 537 aaPredicted RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 SLC25A13Q9UJS0 675 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 RPS6KA6Q9UK32 745 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 ACTL7AQ9Y615 435 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 A0A1W2PQ67 120 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 ANKDD1BA6NHY2 528 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TEX28O15482 410 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 NPHS1O60500 1241 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 RSL1D1O76021 490 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 SLC25A14O95258 325 aaPredicted RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TIMP1P01033 207 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 IGLV3-27P01718 113 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 GNAZP19086 355 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 UGT1A1P22309 533 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 UGT1A4P22310 534 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 IGFBP5P24593 272 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 UGT1A3P35503 534 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 UGT1A5P35504 534 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 FEN1P39748 380 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 ENTPD1P49961 510 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 SRP54P61011 504 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 RAB14P61106 215 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CYP4F8P98187 520 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 SEMG2Q02383 582 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 RAB33AQ14088 237 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 FAM174BQ3ZCQ3 159 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 DENND5AQ6IQ26 1287 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TLDC1Q6P9B6 456 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TXNDC11Q6PKC3 985 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 PAQR3Q6TCH7 311 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 KDELC1Q6UW63 502 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TBC1D19Q8N5T2 526 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 AADATQ8N5Z0 425 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CEP295NLQ96MC4 621 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TMEM74Q96NL1 305 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 HERC2P3Q9BVR0 1158 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CCDC106Q9BWC9 280 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 RNF38Q9H0F5 515 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 GALPQ9UBC7 116 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 PDE10AQ9Y233 779 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 hCG_2039718K7EN88 272 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 BCKDKO14874 412 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 FGF18O76093 207 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TFPTP0C1Z6 253 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 GLDCP23378 1020 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 AZGP1P25311 298 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 SERPINA4P29622 427 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 PPP2R1BP30154 601 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CAPGP40121 348 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 ECT2LQ008S8 904 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 RHDQ02161 417 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 PPP1R3AQ16821 1122 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TIMM50Q3ZCQ8 353 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 XKR6Q5GH73 641 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 RABL3Q5HYI8 236 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CCNYL2Q5T2Q4 361 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CMTR2Q8IYT2 770 aaKnown RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CAMKK1Q8N5S9 505 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 FAR1Q8WVX9 515 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 FAM210AQ96ND0 272 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CORO1BQ9BR76 489 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 C2orf49Q9BVC5 232 aaPredicted RBP9.82□□□□□ -0.84
TRAF1-202ENST00000540010 EXD2Q9NVH0 621 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 TSC2P49815 1807 aa9.82□□□□□ -0.84
TRAF1-202ENST00000540010 CARNS1A5YM72 827 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 GJB3O75712 270 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 IGSF6O95976 241 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 CATP04040 527 aaKnown RBP9.81□□□□□ -0.84
TRAF1-202ENST00000540010 HMGA1P17096 107 aaKnown RBP9.81□□□□□ -0.84
TRAF1-202ENST00000540010 ADRA1AP35348 466 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 DGKQP52824 942 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 TLR1Q15399 786 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 ZNF683Q8IZ20 524 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 WDR36Q8NI36 951 aaKnown RBP9.81□□□□□ -0.84
TRAF1-202ENST00000540010 GPR22Q99680 433 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 ZBTB26Q9HCK0 441 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 RAB23Q9ULC3 237 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 ARL5AQ9Y689 179 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 CLDN25C9JDP6 229 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 CACNG3O60359 315 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 ABLIM3O94929 683 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 NDST3O95803 873 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 POU2F1P14859 743 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 CTSKP43235 329 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 CDC42P60953 191 aa9.81□□□□□ -0.84
TRAF1-202ENST00000540010 DDI2Q5TDH0 399 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms