RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CYP1B1Q16678 543 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 FAM83HQ6ZRV2 1179 aaPredicted RBP14.58□□□□□ -0.08
USB1-203ENST00000539737 MICALCLQ6ZW33 695 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 PRSS42Q7Z5A4 293 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 LRRTM4Q86VH4 590 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 TMEM151BQ8IW70 566 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 GRK7Q8WTQ7 553 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 KLHL6Q8WZ60 621 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 MAGOHBQ96A72 148 aaKnown RBP14.58□□□□□ -0.08
USB1-203ENST00000539737 MAP3K3Q99759 626 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 AP1M1Q9BXS5 423 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 ZCCHC2Q9C0B9 1178 aaKnown RBP14.58□□□□□ -0.08
USB1-203ENST00000539737 ETNK1Q9HBU6 452 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 SLC40A1Q9NP59 571 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 EIF2B3Q9NR50 452 aaKnown RBP14.58□□□□□ -0.08
USB1-203ENST00000539737 RAB6BQ9NRW1 208 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 SAR1BQ9Y6B6 198 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 STX7O15400 261 aaKnown RBP14.57□□□□□ -0.08
USB1-203ENST00000539737 PHF2O75151 1096 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 SUN1O94901 812 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 CDK14O94921 469 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 GAS8O95995 478 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 BPIP17213 487 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 NELFEP18615 380 aaKnown RBP14.57□□□□□ -0.08
USB1-203ENST00000539737 SPAM1P38567 509 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 KCNJ1P48048 391 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 FOXL2P58012 376 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 OLIG2Q13516 323 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 UGT8Q16880 541 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 DENND5AQ6IQ26 1287 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 C11orf96Q7Z7L8 435 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 APLFQ8IW19 511 aaPredicted RBP14.57□□□□□ -0.08
USB1-203ENST00000539737 TAB3Q8N5C8 712 aaPredicted RBP14.57□□□□□ -0.08
USB1-203ENST00000539737 DTX3LQ8TDB6 740 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 BRSK1Q8TDC3 778 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 C19orf43Q9BQ61 176 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 NUDT9Q9BW91 350 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 ING2Q9H160 280 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 IL17CQ9P0M4 197 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 FAM8A1Q9UBU6 413 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 ERRFI1Q9UJM3 462 aaPredicted RBP14.57□□□□□ -0.08
USB1-203ENST00000539737 PCDHGA6Q9Y5G7 932 aa14.57□□□□□ -0.08
USB1-203ENST00000539737 CHUKO15111 745 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 ZNF185O15231 689 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 APRTP07741 180 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 ZSCAN5DPP0CG00 497 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 ETS1P14921 441 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 LPOP22079 712 aaPredicted RBP14.56□□□□□ -0.08
USB1-203ENST00000539737 PBLDP30039 288 aaPredicted RBP14.56□□□□□ -0.08
USB1-203ENST00000539737 RPL22P35268 128 aaKnown RBP14.56□□□□□ -0.08
USB1-203ENST00000539737 COILP38432 576 aaPredicted RBP14.56□□□□□ -0.08
USB1-203ENST00000539737 CLCNKAP51800 687 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 BASP1P80723 227 aaKnown RBP14.56□□□□□ -0.08
USB1-203ENST00000539737 CDH17Q12864 832 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 IL11RAQ14626 422 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
USB1-203ENST00000539737 TTC27Q6P3X3 843 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 CCDC137Q6PK04 289 aaKnown RBP14.56□□□□□ -0.08
USB1-203ENST00000539737 PPP1R21Q6ZMI0 780 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 GLIS1Q8NBF1 620 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 SIDT2Q8NBJ9 832 aaKnown RBP14.56□□□□□ -0.08
USB1-203ENST00000539737 FDCSPQ8NFU4 85 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 MR1Q95460 341 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 CXorf40BQ96DE9 158 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 TIMM29Q9BSF4 260 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 CHST8Q9H2A9 424 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 UCK1Q9HA47 277 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 ACSS2Q9NR19 701 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 SMARCAL1Q9NZC9 954 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 RARRES3Q9UL19 164 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 ARL5AQ9Y689 179 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 CROCCQ5TZA2 2017 aa14.56□□□□□ -0.08
USB1-203ENST00000539737 ANKRD17O75179 2603 aaKnown RBP14.55□□□□□ -0.08
USB1-203ENST00000539737 MDC1Q14676 2089 aaKnown RBP14.55□□□□□ -0.08
USB1-203ENST00000539737 GLYATL1P3A0A0U1RQE8 302 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 AP3B1O00203 1094 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 IDSP22304 550 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 PTPN4P29074 926 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 HALP42357 657 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 ZNF140P52738 457 aaPredicted RBP14.55□□□□□ -0.08
USB1-203ENST00000539737 CTSCP53634 463 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 ITGA1P56199 1179 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 ITGA9Q13797 1035 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 NR6A1Q15406 480 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 JMJD6Q6NYC1 403 aaPredicted RBP14.55□□□□□ -0.08
USB1-203ENST00000539737 PRUNE1Q86TP1 453 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 TRAPPC5Q8IUR0 188 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 C17orf53Q8N3J3 647 aaPredicted RBP14.55□□□□□ -0.08
USB1-203ENST00000539737 RBMXL3Q8N7X1 1067 aaKnown RBP14.55□□□□□ -0.08
USB1-203ENST00000539737 DNAAF3Q8N9W5 541 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 CAPZA3Q96KX2 299 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 VPS35Q96QK1 796 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 RNF14Q9UBS8 474 aa14.55□□□□□ -0.08
USB1-203ENST00000539737 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.54□□□□□ -0.08
USB1-203ENST00000539737 BUD23O43709 281 aaKnown RBP14.54□□□□□ -0.08
USB1-203ENST00000539737 KCNJ13O60928 360 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 KRT14P02533 472 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 HADHAP40939 763 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 PAFAH1B1P43034 410 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 ETF1P62495 437 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms