RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ARHGAP9Q9BRR9 750 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 TWSG1Q9GZX9 223 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 MVB12BQ9H7P6 319 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 FGF21Q9NSA1 209 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 PAK5Q9P286 719 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 CROTQ9UKG9 612 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 BTRCQ9Y297 605 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 TCAF1Q9Y4C2 921 aa16.3■□□□□ 0.2
DDB1-215ENST00000539712 UBR5O95071 2799 aaPredicted RBP16.29■□□□□ 0.2
DDB1-215ENST00000539712 UBA6A0AVT1 1052 aaPredicted RBP16.29■□□□□ 0.2
DDB1-215ENST00000539712 SLC5A10A0PJK1 596 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 SLC9B1P1A6NJY1 282 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 E7EVH7 732 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 BTN3A1O00481 513 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 ZBTB11O95625 1053 aaPredicted RBP16.29■□□□□ 0.2
DDB1-215ENST00000539712 PRKAR1AP10644 381 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 DLSTP36957 453 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 KCNJ1P48048 391 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 CDC20Q12834 499 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 NFATC3Q12968 1075 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 PRKG2Q13237 762 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 GPR19Q15760 415 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 CRTC2Q53ET0 693 aaPredicted RBP16.29■□□□□ 0.2
DDB1-215ENST00000539712 BPHLQ86WA6 291 aaPredicted RBP16.29■□□□□ 0.2
DDB1-215ENST00000539712 ADGRF3Q8IZF5 1079 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 CARFQ8N187 725 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 CCDC89Q8N998 374 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 SLC38A9Q8NBW4 561 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 OR4L1Q8NH43 312 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 ZNF501Q96CX3 271 aaPredicted RBP16.29■□□□□ 0.2
DDB1-215ENST00000539712 ALS2CR12Q96Q35 445 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 EFHD1Q9BUP0 239 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 PITPNM3Q9BZ71 974 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 SRMSQ9H3Y6 488 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 VPS37BQ9H9H4 285 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 PDE7BQ9NP56 450 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 EIF2B3Q9NR50 452 aaKnown RBP16.29■□□□□ 0.2
DDB1-215ENST00000539712 CHRAC1Q9NRG0 131 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 LNPEPQ9UIQ6 1025 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 RARRES3Q9UL19 164 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 ZKSCAN5Q9Y2L8 839 aa16.29■□□□□ 0.2
DDB1-215ENST00000539712 SPENQ96T58 3664 aaKnown RBP16.29■□□□□ 0.2
DDB1-215ENST00000539712 MYO18BQ8IUG5 2567 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 IFRD1O00458 451 aaPredicted RBP16.28■□□□□ 0.2
DDB1-215ENST00000539712 LIN7AO14910 233 aaPredicted RBP16.28■□□□□ 0.2
DDB1-215ENST00000539712 NTRK1P04629 796 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 FURINP09958 794 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 PRDX3P30048 256 aaKnown RBP16.28■□□□□ 0.2
DDB1-215ENST00000539712 CXCR5P32302 372 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 LMAN1P49257 510 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 POLE2P56282 527 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 TUBB4BP68371 445 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 ACY1Q03154 408 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 TUBB2AQ13885 445 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 KRT33BQ14525 404 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 AFTPHQ6ULP2 937 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 PRELID2Q8N945 189 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 TRIM58Q8NG06 486 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 OR5AR1Q8NGP9 310 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 PEX13Q92968 403 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 STAMBPL1Q96FJ0 436 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 CATSPER2Q96P56 530 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 TUBB2BQ9BVA1 445 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 XKR8Q9H6D3 395 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 LHX9Q9NQ69 397 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 C1GALT1Q9NS00 363 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 TREX1Q9NSU2 369 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 MARCH4Q9P2E8 410 aaPredicted RBP16.28■□□□□ 0.2
DDB1-215ENST00000539712 PADI1Q9ULC6 663 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 ICKQ9UPZ9 632 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 PPP2R2CQ9Y2T4 447 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 PCDHGA6Q9Y5G7 932 aa16.28■□□□□ 0.2
DDB1-215ENST00000539712 FLNCQ14315 2725 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 GAS8O95995 478 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 CRADDP78560 199 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 NFKB2Q00653 900 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 LAMB3Q13751 1172 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 BRD3Q15059 726 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 ZNF789Q5FWF6 425 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 PRAMEF17Q5VTA0 474 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 LYPLAL1Q5VWZ2 237 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 ARMC6Q6NXE6 501 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 ZNF517Q6ZMY9 492 aaPredicted RBP16.27■□□□□ 0.2
DDB1-215ENST00000539712 NLRP9Q7RTR0 991 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 LDB1Q86U70 411 aaPredicted RBP16.27■□□□□ 0.2
DDB1-215ENST00000539712 AMIGO1Q86WK6 493 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 OR6P1Q8NGX9 317 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 FLVCR1-AS1Q8TAF5 88 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 LKAAEAR1Q8TD35 194 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 CT55Q8WUE5 264 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 ELMO1Q92556 727 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 RUFY1Q96T51 708 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 HGH1Q9BTY7 390 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 ADNPQ9H2P0 1102 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 CDYLQ9Y232 598 aa16.27■□□□□ 0.2
DDB1-215ENST00000539712 SEC16AO15027 2179 aa16.27■□□□□ 0.19
DDB1-215ENST00000539712 TCRBV7S3A2A0A539 114 aa16.26■□□□□ 0.19
DDB1-215ENST00000539712 MATN2O00339 956 aa16.26■□□□□ 0.19
DDB1-215ENST00000539712 QSOX1O00391 747 aa16.26■□□□□ 0.19
DDB1-215ENST00000539712 CEP104O60308 925 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms