RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 GRB7Q14451 532 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 NR1D2Q14995 579 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 TNFAIP8L3Q5GJ75 292 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 TMPRSS9Q7Z410 1059 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 CTAGE3PQ8IX95 158 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 SLC44A1Q8WWI5 657 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 VPS39Q96JC1 886 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 TTC1Q99614 292 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 GPR22Q99680 433 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 MENTQ9BUN1 341 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 ZNF180Q9UJW8 692 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 ACSL5Q9ULC5 683 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 PADI4Q9UM07 663 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 NOVA2Q9UNW9 492 aaKnown RBP12.69□□□□□ -0.38
CCDC42-202ENST00000539522 DHRS7Q9Y394 339 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 ASPMQ8IZT6 3477 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 GOLGA4Q13439 2230 aaKnown RBP12.69□□□□□ -0.38
CCDC42-202ENST00000539522 FAM95CA0A1B0GW59 222 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 A0A1W2PQM1 296 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 PDZK1P1A8MUH7 402 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 QSOX1O00391 747 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 PFDN6O15212 129 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 B4GAT1O43505 415 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 KCNK5O95279 499 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 INHBAP08476 426 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 MTHFD1P11586 935 aaKnown RBP12.68□□□□□ -0.38
CCDC42-202ENST00000539522 CKMT2P17540 419 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 CHRM3P20309 590 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 OAS2P29728 719 aaKnown RBP12.68□□□□□ -0.38
CCDC42-202ENST00000539522 GP5P40197 560 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 SERPINB9P50453 376 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 LIMK2P53671 638 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 HSPA14Q0VDF9 509 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 RPA4Q13156 261 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 BMPR2Q13873 1038 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 TRIP6Q15654 476 aaKnown RBP12.68□□□□□ -0.38
CCDC42-202ENST00000539522 ZKSCAN8Q15776 578 aaPredicted RBP12.68□□□□□ -0.38
CCDC42-202ENST00000539522 CCSMST1Q4G0I0 132 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 TTMPQ5BVD1 217 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 PAQR3Q6TCH7 311 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 PDZD3Q86UT5 571 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 CPNE9Q8IYJ1 553 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 ZBTB2Q8N680 514 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 PHC3Q8NDX5 983 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 ANKRD49Q8WVL7 239 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 JPH3Q8WXH2 748 aaPredicted RBP12.68□□□□□ -0.38
CCDC42-202ENST00000539522 DLG3Q92796 817 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 GLMNQ92990 594 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 CCDC74AQ96AQ1 378 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 TLCD1Q96CP7 247 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 MRRFQ96E11 262 aaKnown RBP12.68□□□□□ -0.38
CCDC42-202ENST00000539522 PAFAH2Q99487 392 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 CPNE1Q99829 537 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 TWSG1Q9GZX9 223 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 SLC40A1Q9NP59 571 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 SARS2Q9NP81 518 aaKnown RBP12.68□□□□□ -0.38
CCDC42-202ENST00000539522 NSMCE4AQ9NXX6 385 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 EURLQ9NYK6 297 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 PSMC3IPQ9P2W1 217 aaPredicted RBP12.68□□□□□ -0.38
CCDC42-202ENST00000539522 CPNE7Q9UBL6 633 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 FTSJ1Q9UET6 329 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 CDV3Q9UKY7 258 aaKnown RBP12.68□□□□□ -0.38
CCDC42-202ENST00000539522 DOLKQ9UPQ8 538 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 VWA7Q9Y334 891 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 ADAMTS20P59510 1910 aa12.68□□□□□ -0.38
CCDC42-202ENST00000539522 KIR2DS5A0A0G2JLQ3 304 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 A0A0G2JNG1 304 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 IQANK1A0A1B0GTG1 560 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 KLHL33A6NCF5 533 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 FOXO6A8MYZ6 492 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 H3BMM5 538 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 KIR2DS3K7RE56 304 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 TNFSF14O43557 240 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 MATN4O95460 622 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 ALPPL2P10696 532 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 GLB1P16278 677 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 CNTFP26441 200 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 KIR2DS5Q14953 304 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 NR0B2Q15466 257 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 PLEKHS1Q5SXH7 462 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 GRTP1Q5TC63 336 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 TAOK1Q7L7X3 1001 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 EFL1Q7Z2Z2 1120 aaKnown RBP12.67□□□□□ -0.38
CCDC42-202ENST00000539522 GPATCH11Q8N954 259 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 LMNTD1Q8N9Z9 388 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 OR5AR1Q8NGP9 310 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 IFI44Q8TCB0 444 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 MAPK15Q8TD08 544 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 MZB1Q8WU39 189 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 EEF1AKMT1Q8WVE0 214 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 C12orf66Q96MD2 445 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 PANX3Q96QZ0 392 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 RTKNQ9BST9 563 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 TBC1D10AQ9BXI6 508 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 KLHL42Q9P2K6 505 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 LRIT1Q9P2V4 623 aa12.67□□□□□ -0.38
CCDC42-202ENST00000539522 TSR3Q9UJK0 312 aaKnown RBP12.67□□□□□ -0.38
CCDC42-202ENST00000539522 CORO1CQ9ULV4 474 aaPredicted RBP12.67□□□□□ -0.38
CCDC42-202ENST00000539522 COMMD10Q9Y6G5 202 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms