RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 HIST1H2AHQ96KK5 128 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 HIST1H2AJQ99878 128 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 SIKE1Q9BRV8 207 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 H2AFJQ9BTM1 129 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 TUBB6Q9BUF5 446 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 COG4Q9H9E3 785 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 CAPN10Q9HC96 672 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 SNX15Q9NRS6 342 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 TMEM74BQ9NUR3 256 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 POLG2Q9UHN1 485 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 GRID1Q9ULK0 1009 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 TMCO1Q9UM00 188 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 SNX11Q9Y5W9 270 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ARHGEF17Q96PE2 2063 aaPredicted RBP10.03□□□□□ -0.8
CLPB-210ENST00000539148 CFAP54Q96N23 3096 aa10.03□□□□□ -0.8
CLPB-210ENST00000539148 ANKRD12Q6UB98 2062 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 A0A1B0GTQ1 180 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 CCT8L1PA6NM43 557 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 ZNF839A8K0R7 811 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 TCP11X1B4DZS4 312 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 LMO7DNF2Z398 122 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 SLC16A5O15375 505 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 ZBTB14O43829 449 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 HNRNPCL1O60812 293 aaKnown RBP10.02□□□□□ -0.81
CLPB-210ENST00000539148 GLRA3O75311 464 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 PIAS1O75925 651 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 PIAS2O75928 621 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 DCTN3O75935 186 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 TGDSO95455 350 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 S100BP04271 92 aaPredicted RBP10.02□□□□□ -0.81
CLPB-210ENST00000539148 ENO2P09104 434 aaPredicted RBP10.02□□□□□ -0.81
CLPB-210ENST00000539148 RBP1P09455 135 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 F3P13726 295 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 ZNF37AP17032 561 aaPredicted RBP10.02□□□□□ -0.81
CLPB-210ENST00000539148 CYP2A7P20853 494 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 CCR7P32248 378 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 CRHR1P34998 444 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 HSD17B2P37059 387 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 CLCN7P51798 805 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 CTBSQ01459 385 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 SLC14A1Q13336 389 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 BMPR2Q13873 1038 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 SETDB1Q15047 1291 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 CSRP2Q16527 193 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 HLA-BQ31612 363 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 UAP1L1Q3KQV9 507 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 RBM20Q5T481 1227 aaKnown RBP10.02□□□□□ -0.81
CLPB-210ENST00000539148 ZNF648Q5T619 568 aaPredicted RBP10.02□□□□□ -0.81
CLPB-210ENST00000539148 ZNF549Q6P9A3 640 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 ABRAXAS1Q6UWZ7 409 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 FRA10AC1Q70Z53 315 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 SPATA21Q7Z572 469 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 ADAMTSL2Q86TH1 951 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 SLC9B2Q86UD5 537 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 PDZD3Q86UT5 571 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 ZNF547Q8IVP9 402 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 HOMEZQ8IX15 550 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 LRRC34Q8IZ02 419 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 SLC22A15Q8IZD6 547 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 FAM46DQ8NEK8 389 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 CD200R1Q8TD46 325 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 MCOLN3Q8TDD5 553 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 LMX1AQ8TE12 382 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 MZB1Q8WU39 189 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 ZBTB9Q96C00 473 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 CXorf40BQ96DE9 158 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 GTPBP2Q9BX10 602 aaKnown RBP10.02□□□□□ -0.81
CLPB-210ENST00000539148 RAB11FIP5Q9BXF6 653 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.02□□□□□ -0.81
CLPB-210ENST00000539148 DERL2Q9GZP9 239 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 ZMYND15Q9H091 742 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 GAREM1Q9H706 876 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 MVB12BQ9H7P6 319 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 MRPL40Q9NQ50 206 aaKnown RBP10.02□□□□□ -0.81
CLPB-210ENST00000539148 SLC17A6Q9P2U8 582 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 CTNNAL1Q9UBT7 734 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 PCOLCE2Q9UKZ9 415 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 DNAJC16Q9Y2G8 782 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 PCDHGB2Q9Y5G2 931 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 PRSS21Q9Y6M0 314 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 KNL1Q8NG31 2342 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 SPTBN4Q9H254 2564 aa10.02□□□□□ -0.81
CLPB-210ENST00000539148 BPTFQ12830 3046 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 PCM1Q15154 2024 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 SLC5A10A0PJK1 596 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 PROB1E7EW31 1015 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 SCAMP1O15126 338 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 SGTAO43765 313 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 PCDHGA12O60330 932 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 GPC4O75487 556 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 SNUPNO95149 360 aaKnown RBP10.01□□□□□ -0.81
CLPB-210ENST00000539148 KLHL2O95198 593 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 ALDOAP04075 364 aaKnown RBP10.01□□□□□ -0.81
CLPB-210ENST00000539148 C2P06681 752 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 CCDC166P0CW27 439 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 ENGP17813 658 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 ITGB6P18564 788 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 TAC1P20366 129 aa10.01□□□□□ -0.81
CLPB-210ENST00000539148 RASSF2P50749 326 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms