RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 PCDHGB1Q9Y5G3 927 aa10.52□□□□□ -0.73
RTN3-208ENST00000537981 MYLKQ15746 1914 aa10.52□□□□□ -0.73
RTN3-208ENST00000537981 A0A1B0GTL3 188 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 A0A1W2PQ09 198 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 LRRC14BA6NHZ5 514 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 TNFRSF21O75509 655 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 ITGA2P17301 1181 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 NMBRP28336 390 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 ZNF45Q02386 682 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 HYAL2Q12891 473 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 CTBP1Q13363 440 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 GPR68Q15743 365 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 SWI5Q1ZZU3 235 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 NDUFAF5Q5TEU4 345 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 ZNF470Q6ECI4 717 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 KCNMB4Q86W47 210 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 NXPE3Q969Y0 559 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 PTERQ96BW5 349 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 KATNAL1Q9BW62 490 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 CYP3A43Q9HB55 503 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 BRD7Q9NPI1 651 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 ZNF277Q9NRM2 450 aaPredicted RBP10.51□□□□□ -0.73
RTN3-208ENST00000537981 CXXC1Q9P0U4 656 aaPredicted RBP10.51□□□□□ -0.73
RTN3-208ENST00000537981 ADGRE2Q9UHX3 823 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 ATP6V1HQ9UI12 483 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 ZNF831Q5JPB2 1677 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 COL11A2P13942 1736 aaPredicted RBP10.51□□□□□ -0.73
RTN3-208ENST00000537981 SIPA1L1O43166 1804 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 A0A0B4J203 849 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 MAGEB16A2A368 324 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 BCKDKO14874 412 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 SYN3O14994 580 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 RGS5O15539 181 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 TNNI3P19429 210 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 TM4SF1P30408 202 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 NPY2RP49146 381 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 MAP2K6P52564 334 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 MTPNP58546 118 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 GPR85P60893 370 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 TCP10Q12799 353 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 NFYCQ13952 458 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 PTPRCAPQ14761 206 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 FBXO48Q5FWF7 155 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 IER5Q5VY09 327 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 KIAA1841Q6NSI8 718 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 FIP1L1Q6UN15 594 aaKnown RBP10.51□□□□□ -0.73
RTN3-208ENST00000537981 KDELC1Q6UW63 502 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 UNC5DQ6UXZ4 953 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 TIGD4Q8IY51 512 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 CYP4Z2PQ8N1L4 340 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 PGBD5Q8N414 524 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 SH3RF2Q8TEC5 729 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 PDLIM5Q96HC4 596 aaKnown RBP10.51□□□□□ -0.73
RTN3-208ENST00000537981 SEC22CQ9BRL7 303 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 VNN3Q9NY84 501 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 MORF4L1Q9UBU8 362 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 KCNH4Q9UQ05 1017 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 BTRCQ9Y297 605 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 MRPS7Q9Y2R9 242 aaKnown RBP10.51□□□□□ -0.73
RTN3-208ENST00000537981 NDUFAF1Q9Y375 327 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 USP34Q70CQ2 3546 aa10.51□□□□□ -0.73
RTN3-208ENST00000537981 TRAV19A0A0A6YYK7 116 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 KCNK1O00180 336 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 KLF4O43474 513 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 MED26O95402 600 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 ASS1P00966 412 aaKnown RBP10.5□□□□□ -0.73
RTN3-208ENST00000537981 AHSGP02765 367 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 KRT20P35900 424 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 PRIM2P49643 509 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 RGS7P49802 495 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 ZNF143P52747 638 aaPredicted RBP10.5□□□□□ -0.73
RTN3-208ENST00000537981 POLR2GP62487 172 aaKnown RBP eCLIP10.5□□□□□ -0.73
RTN3-208ENST00000537981 FOXK1P85037 733 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 GRM1Q13255 1194 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 ZNF79Q15937 498 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 PSMD5Q16401 504 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 TRIM60Q495X7 471 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 ARMC4Q5T2S8 1044 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 FAM171BQ6P995 826 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 BRAT1Q6PJG6 821 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 ARHGAP36Q6ZRI8 547 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 CCDC190Q86UF4 302 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 ZC3HC1Q86WB0 502 aaKnown RBP10.5□□□□□ -0.73
RTN3-208ENST00000537981 PTRH1Q86Y79 214 aaKnown RBP10.5□□□□□ -0.73
RTN3-208ENST00000537981 CAMKK1Q8N5S9 505 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 HTR3CQ8WXA8 447 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 LPAR1Q92633 364 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 REPS1Q96D71 796 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 HOPXQ9BPY8 73 aaPredicted RBP10.5□□□□□ -0.73
RTN3-208ENST00000537981 CHCHD6Q9BRQ6 235 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 NXF2Q9GZY0 626 aaKnown RBP10.5□□□□□ -0.73
RTN3-208ENST00000537981 DUSP21Q9H596 190 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 CDCP1Q9H5V8 836 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 UBP1Q9NZI7 540 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 ADAM28Q9UKQ2 775 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 STAP1Q9ULZ2 295 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 C2CD4BA6NLJ0 364 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 C1RP00736 705 aa10.5□□□□□ -0.73
RTN3-208ENST00000537981 CHRNA5P30532 468 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms