RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 HIP1O00291 1037 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 CKMT1AP12532 417 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 CCNE1P24864 410 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 GDI1P31150 447 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 CCR2P41597 374 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 GPR12P47775 334 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 ARSFP54793 590 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 SETQ01105 290 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-207ENST00000536634 MYBPC2Q14324 1141 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 SHBQ15464 509 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 FAM78AQ5JUQ0 283 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 PLA2G4FQ68DD2 849 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 FAM83HQ6ZRV2 1179 aaPredicted RBP5.47□□□□□ -1.53
CLIP1-207ENST00000536634 CPOQ8IVL8 374 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 GPR65Q8IYL9 337 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 SPEM1Q8N4L4 309 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 DNAAF1Q8NEP3 725 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 HSPH1Q92598 858 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 MED30Q96HR3 178 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 CPB2Q96IY4 423 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 APOL6Q9BWW8 343 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 CXCL16Q9H2A7 254 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 NXF3Q9H4D5 531 aaKnown RBP5.47□□□□□ -1.53
CLIP1-207ENST00000536634 BARHL2Q9NY43 387 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 GDE1Q9NZC3 331 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 SRPRBQ9Y5M8 271 aaKnown RBP5.47□□□□□ -1.53
CLIP1-207ENST00000536634 PTPN13Q12923 2485 aa5.47□□□□□ -1.53
CLIP1-207ENST00000536634 ARID2Q68CP9 1835 aa5.46□□□□□ -1.53
CLIP1-207ENST00000536634 BOD1L1Q8NFC6 3051 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 A0A096LPK6 155 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 LNP1A1A4G5 178 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 CASTOR2A6NHX0 329 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 CCDC69A6NI79 296 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 SH2D7A6NKC9 451 aaPredicted RBP5.46□□□□□ -1.54
CLIP1-207ENST00000536634 MSH4O15457 936 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 KIF1CO43896 1103 aaKnown RBP5.46□□□□□ -1.54
CLIP1-207ENST00000536634 EXTL3O43909 919 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 TSPAN1O60635 241 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 TADA2AO75478 443 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 CALM1P0DP23 149 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 CALM2P0DP24 149 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 CALM3P0DP25 149 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 NAGAP17050 411 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 CTPS1P17812 591 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 PDLIM4P50479 330 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 NUDT6P53370 316 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 PSMD5Q16401 504 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 ZNF324BQ6AW86 544 aaPredicted RBP5.46□□□□□ -1.54
CLIP1-207ENST00000536634 C19orf48Q6RUI8 117 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 CASC1Q6TDU7 716 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 ANO5Q75V66 913 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 MON1BQ7L1V2 547 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 CDR2LQ86X02 465 aaPredicted RBP5.46□□□□□ -1.54
CLIP1-207ENST00000536634 CEP57Q86XR8 500 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 NUDCD2Q8WVJ2 157 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 RAB40AQ8WXH6 277 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 WASF1Q92558 559 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 TMEM143Q96AN5 459 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 ZSCAN31Q96LW9 406 aaPredicted RBP5.46□□□□□ -1.54
CLIP1-207ENST00000536634 EDEM2Q9BV94 578 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 TRMT61BQ9BVS5 477 aaKnown RBP5.46□□□□□ -1.54
CLIP1-207ENST00000536634 SLC32A1Q9H598 525 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 UBN1Q9NPG3 1134 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 KLK13Q9UKR3 277 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 SF3B1O75533 1304 aaKnown RBP eCLIP5.46□□□□□ -1.54
CLIP1-207ENST00000536634 TRIP11Q15643 1979 aa5.46□□□□□ -1.54
CLIP1-207ENST00000536634 ASAP2O43150 1006 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 CHRM4P08173 479 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 GJA1P17302 382 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 PSMC3P17980 439 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 HOXA6P31267 233 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 OR1D2P34982 312 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 LIFRP42702 1097 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 DSCR9P59020 149 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 LAMTOR4Q0VGL1 99 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 GRIK3Q13003 919 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 TRAF3Q13114 568 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 CAPSQ13938 189 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 CTTNQ14247 550 aaKnown RBP5.45□□□□□ -1.54
CLIP1-207ENST00000536634 COL28A1Q2UY09 1125 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 TDRD12Q587J7 1177 aaKnown RBP5.45□□□□□ -1.54
CLIP1-207ENST00000536634 XKR3Q5GH77 459 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 C8orf82Q6P1X6 216 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-207ENST00000536634 PDXDC1Q6P996 788 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 CACNA2D4Q7Z3S7 1137 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 CHD1LQ86WJ1 897 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 RNF149Q8NC42 400 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 MCPH1Q8NEM0 835 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 EXOC6Q8TAG9 804 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 PRPF31Q8WWY3 499 aaKnown RBP5.45□□□□□ -1.54
CLIP1-207ENST00000536634 CNOT9Q92600 299 aaKnown RBP5.45□□□□□ -1.54
CLIP1-207ENST00000536634 TRIM63Q969Q1 353 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 CLK4Q9HAZ1 481 aaKnown RBP5.45□□□□□ -1.54
CLIP1-207ENST00000536634 ZFP14Q9HCL3 533 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 TRPV5Q9NQA5 729 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 WRAP73Q9P2S5 460 aaPredicted RBP5.45□□□□□ -1.54
CLIP1-207ENST00000536634 IL36RNQ9UBH0 155 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 SUFUQ9UMX1 484 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 PCDHGA5Q9Y5G8 931 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 TEX15Q9BXT5 2789 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms