RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 MRPL47Q9HD33 250 aaKnown RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 IL1RAPQ9NPH3 570 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 DCP1AQ9NPI6 582 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 RASSF1Q9NS23 344 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 KCNH7Q9NS40 1196 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 FAM118AQ9NWS6 357 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 GTSE1Q9NYZ3 720 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 SLAMF8Q9P0V8 285 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TRMT6Q9UJA5 497 aaKnown RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 NRCAMQ92823 1304 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 A0A0G2JLL6 359 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 SLC15A5A6NIM6 579 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 MUSKO15146 869 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ST8SIA5O15466 376 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ZNF623O75123 536 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SOAT2O75908 522 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 MLYCDO95822 493 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FTH1P02794 183 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 TNNI1P19237 187 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 HK1P19367 917 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 HMGCLP35914 325 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 LIPAP38571 399 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PIK3CBP42338 1070 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 CDKN2BP42772 138 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SLC15A1P46059 708 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SERPINB10P48595 397 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 VAMP7P51809 220 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SESN2P58004 480 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 SRP54P61011 504 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 IL5RAQ01344 420 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 GCNT1Q02742 428 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 KCTD2Q14681 263 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 CLCA4Q14CN2 919 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PUM3Q15397 648 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 KIF19Q2TAC6 998 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 VPS26BQ4G0F5 336 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ARMC4Q5T2S8 1044 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SH3PXD2AQ5TCZ1 1133 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FRMPD2BQ6IN97 320 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FAM180BQ6P0A1 224 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 RBMS3Q6XE24 437 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 USP51Q70EK9 711 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 THAP5Q7Z6K1 395 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PRRT2Q7Z6L0 340 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 CUZD1Q86UP6 607 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FBXO11Q86XK2 927 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 RFX6Q8HWS3 928 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 RNF135Q8IUD6 432 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 LACC1Q8IV20 430 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 KATNAL2Q8IYT4 538 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 TMEM130Q8N3G9 435 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FAM86B1Q8N7N1 296 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 KIAA1958Q8N8K9 716 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ATG16L2Q8NAA4 619 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 FNDC5Q8NAU1 212 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SLC35B2Q8TB61 432 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 CD99L2Q8TCZ2 262 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PHF10Q8WUB8 498 aaKnown RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 FAM151AQ8WW52 585 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 IPCEF1Q8WWN9 437 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 SOCS4Q8WXH5 440 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 RORBQ92753 470 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ATOH1Q92858 354 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 TOP1MTQ969P6 601 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 KCNA7Q96RP8 456 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 NPAS1Q99742 590 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 C9orf16Q9BUW7 83 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 NTMT1Q9BV86 223 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 KIFC3Q9BVG8 833 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 RAB34Q9BZG1 259 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 GALNT9Q9HCQ5 603 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 CYP4F12Q9HCS2 524 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SH3GLB2Q9NR46 395 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 CCM2LQ9NUG4 571 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 RDH8Q9NYR8 311 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ZNF70Q9UC06 446 aaPredicted RBP3.66□□□□□ -1.82
MCF2-210ENST00000536274 CD300AQ9UGN4 299 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGC4Q9Y5F7 938 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGB7Q9Y5F8 929 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGB2Q9Y5G2 931 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGB1Q9Y5G3 927 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGA6Q9Y5G7 932 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGA5Q9Y5G8 931 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGA1Q9Y5H4 931 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 XIRP2A4UGR9 3374 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 A0A1B0GV90 55 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 A0A1W2PQ09 198 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 POM121BA6NF01 834 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 METTL15A6NJ78 407 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 G3V2L1 256 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 SLC1A7O00341 560 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 NR5A2O00482 541 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 TBX3O15119 743 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 ARPC2O15144 300 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 KCNN4O15554 427 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 GMDSO60547 372 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 MSCO60682 206 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 HUS1O60921 280 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 PRSS23O95084 383 aa3.66□□□□□ -1.82
MCF2-210ENST00000536274 CCNE2O96020 404 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms