RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ANGPT1Q15389 498 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 SNX30Q5VWJ9 437 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 TMEM184AQ6ZMB5 413 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 ZC3HC1Q86WB0 502 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 TDRPQ86YL5 185 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 TTC39CQ8N584 583 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 ANKRD52Q8NB46 1076 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 DBF4BQ8NFT6 615 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 ELP5Q8TE02 316 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 INPP5DQ92835 1189 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 SAT2Q96F10 170 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 RRNAD1Q96FB5 475 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 TXNDC15Q96J42 360 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 LYZL4Q96KX0 146 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 DUX5Q96PT3 197 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 FTHL17Q9BXU8 183 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 POLDIP3Q9BY77 421 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 TM6SF1Q9BZW5 370 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 SPRTNQ9H040 489 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 MRPL44Q9H9J2 332 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 FKRPQ9H9S5 495 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 RAVER2Q9HCJ3 691 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 RANGRFQ9HD47 186 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 HINT3Q9NQE9 182 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 SEPT11Q9NVA2 429 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 MAP3K20Q9NYL2 800 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 CLIP2Q9UDT6 1046 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 AGO1Q9UL18 857 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 EXO1Q9UQ84 846 aaKnown RBP3.28□□□□□ -1.88
SNHG1-202ENST00000535689 RIPK3Q9Y572 518 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 RAI2Q9Y5P3 530 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 NFS1Q9Y697 457 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 STON1Q9Y6Q2 735 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 CHD6Q8TD26 2715 aa3.28□□□□□ -1.88
SNHG1-202ENST00000535689 ANKRD11Q6UB99 2663 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-202ENST00000535689 MIA3Q5JRA6 1907 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 LOXHD1Q8IVV2 1947 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 ASTN1O14525 1302 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 A0A0U1RQJ8 604 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 CDRT15L2A8MXV6 281 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 INO80B-WBP1J3KQ70 363 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 SPINT2O43291 252 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 RGS14O43566 566 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 LRP3O75074 770 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 FGF2P09038 288 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 TGFB3P10600 412 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 MAOAP21397 527 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 MAGEA9P43362 315 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 SEC61A1P61619 476 aaKnown RBP3.27□□□□□ -1.89
SNHG1-202ENST00000535689 CSNK2A1P68400 391 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-202ENST00000535689 MC1RQ01726 317 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 CNTN2Q02246 1040 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 TRAF1Q13077 416 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 GPS2Q13227 327 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 GIT2Q14161 759 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 STXBP2Q15833 593 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 CTF1Q16619 201 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF528Q3MIS6 628 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 SLC45A4Q5BKX6 768 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 C12orf60Q5U649 245 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 FRG2Q64ET8 278 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 JADE1Q6IE81 842 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 TRNP1Q6NT89 227 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 TTI2Q6NXR4 508 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 IRF2BP2Q7Z5L9 587 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 GALNT5Q7Z7M9 940 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 ERC1Q8IUD2 1116 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 DHX40Q8IX18 779 aaKnown RBP3.27□□□□□ -1.89
SNHG1-202ENST00000535689 SPATA6LQ8N4H0 392 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 NRACQ8N912 160 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 CCDC89Q8N998 374 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 GMCL1P1Q8NEA9 526 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 CSNK2A3Q8NEV1 391 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 THAP6Q8TBB0 222 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 WFIKKN2Q8TEU8 576 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 ARHGAP45Q92619 1136 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 CASP10Q92851 521 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 PHF21BQ96EK2 531 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 FAM120BQ96EK7 910 aaKnown RBP3.27□□□□□ -1.89
SNHG1-202ENST00000535689 APOLD1Q96LR9 279 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF385AQ96PM9 386 aaKnown RBP3.27□□□□□ -1.89
SNHG1-202ENST00000535689 IWS1Q96ST2 819 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 MEIS3Q99687 375 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 SLX1AQ9BQ83 275 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 MSTO1Q9BUK6 570 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 HEMGNQ9BXL5 484 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 PCDH9Q9HC56 1237 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 SLC35C2Q9NQQ7 365 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 ZBTB40Q9NUA8 1239 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 CYP39A1Q9NYL5 469 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 RNF7Q9UBF6 113 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 CTNNAL1Q9UBT7 734 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 STK39Q9UEW8 545 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF215Q9UL58 517 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-202ENST00000535689 RAB23Q9ULC3 237 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 ISY1Q9ULR0 285 aaKnown RBP3.27□□□□□ -1.89
SNHG1-202ENST00000535689 NENFQ9UMX5 172 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 PCDHA7Q9UN72 937 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 GPR34Q9UPC5 381 aa3.27□□□□□ -1.89
SNHG1-202ENST00000535689 PA2G4Q9UQ80 394 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms