RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 OSBPL9Q96SU4 736 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 ULBP3Q9BZM4 244 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 TFB2MQ9H5Q4 396 aaKnown RBP29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 TRMT1Q9NXH9 659 aaKnown RBP29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 KALRNO60229 2985 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 SLC5A10A0PJK1 596 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 KIF5CO60282 957 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 PRB1P04280 392 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 NMBRP28336 390 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 COILP38432 576 aaPredicted RBP29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 MAGEA6P43360 314 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 ARL4DP49703 201 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 KPNA2P52292 529 aaKnown RBP29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 PLOD1Q02809 727 aaPredicted RBP29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 ABHD18Q0P651 414 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 MAP7Q14244 749 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 SYTL3Q4VX76 610 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 NAPRTQ6XQN6 538 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 PPP1R3BQ86XI6 285 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 RASGRP3Q8IV61 690 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 CARFQ8N187 725 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 COG1Q8WTW3 980 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 KIFC1Q9BW19 673 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 MRM3Q9HC36 420 aaKnown RBP29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 PDE7BQ9NP56 450 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 SYBUQ9NX95 663 aa29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 MARCH4Q9P2E8 410 aaPredicted RBP29.45■■■□□ 2.31
SSSCA1-207ENST00000533115 MATN2O00339 956 aa29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 CD3EAPO15446 510 aaKnown RBP29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 FOLR1P15328 257 aa29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 ZNF28P17035 718 aa29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 TTPAP49638 278 aa29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 HSD11B2P80365 405 aa29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 SARNPP82979 210 aaKnown RBP29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 KCNAB1Q14722 419 aa29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 LARP7Q4G0J3 582 aaKnown RBP eCLIP29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 CCDC137Q6PK04 289 aaKnown RBP29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 LDB1Q86U70 411 aaPredicted RBP29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 ESX1Q8N693 406 aa29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 ACTRT1Q8TDG2 376 aa29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 HGH1Q9BTY7 390 aa29.44■■■□□ 2.3
SSSCA1-207ENST00000533115 LOC101059948A0A1B0GTJ6 334 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 SPAG6O75602 509 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 ZBTB11O95625 1053 aaPredicted RBP29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 EBLN1P0CF75 366 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 ACADLP28330 430 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 ACY1Q03154 408 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 PRKG2Q13237 762 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 TUBB3Q13509 450 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 D2HGDHQ8N465 521 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 KIAA1143Q96AT1 154 aaPredicted RBP29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 TSSK1BQ9BXA7 367 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 SLC12A9Q9BXP2 914 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 GPN2Q9H9Y4 310 aaPredicted RBP29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 POMT2Q9UKY4 750 aa29.43■■■□□ 2.3
SSSCA1-207ENST00000533115 BHMG1C9JSJ3 638 aaPredicted RBP29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 BTN3A3O00478 584 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 KIAA0754O94854 1291 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 ITGB2P05107 769 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 ITGB6P18564 788 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 CYP4F2P78329 520 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 C6orf15Q6UXA7 325 aaPredicted RBP29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 AMIGO1Q86WK6 493 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 OR5AR1Q8NGP9 310 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 ANP32BQ92688 251 aaKnown RBP29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 RNF31Q96EP0 1072 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 MFSD3Q96ES6 412 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 PPM1MQ96MI6 270 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 NRTNQ99748 197 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 CARD6Q9BX69 1037 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 RARRES3Q9UL19 164 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 SNX12Q9UMY4 172 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 SOX13Q9UN79 622 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 ASF1AQ9Y294 204 aa29.42■■■□□ 2.3
SSSCA1-207ENST00000533115 GSAPA4D1B5 854 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 BTN3A1O00481 513 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 PRMT5O14744 637 aaPredicted RBP29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 CCR7P32248 378 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 ANKRD22Q5VYY1 191 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 CES3Q6UWW8 571 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 BPHLQ86WA6 291 aaPredicted RBP29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 TBC1D21Q8IYX1 336 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 UNC5BQ8IZJ1 945 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 MPP5Q8N3R9 675 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 CPT1BQ92523 772 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 EFHD1Q9BUP0 239 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 XKR8Q9H6D3 395 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 NEU2Q9Y3R4 380 aa29.41■■■□□ 2.3
SSSCA1-207ENST00000533115 CES2O00748 559 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 AVILO75366 819 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 C1QL1O75973 258 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 CDH3P22223 829 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 STAT5AP42229 794 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 LY6DQ14210 128 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 ARMC3Q5W041 872 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 FBXO38Q6PIJ6 1188 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 GALNT6Q8NCL4 622 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 LKAAEAR1Q8TD35 194 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 SLC45A3Q96JT2 553 aa29.4■■■□□ 2.3
SSSCA1-207ENST00000533115 C1GALT1Q9NS00 363 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms