RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 C16orf46Q6P387 395 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 PACS1Q6VY07 963 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 PPP1R21Q6ZMI0 780 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 LINC00523Q86TU6 105 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 VRK3Q8IV63 474 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 ADGRF3Q8IZF5 1079 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 ESX1Q8N693 406 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 ACVR1CQ8NER5 493 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 ZNF501Q96CX3 271 aaPredicted RBP17.3■□□□□ 0.36
SMG1-203ENST00000532700 TRIM4Q9C037 500 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 FGF21Q9NSA1 209 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 TCAF1Q9Y4C2 921 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 SPTBP11277 2137 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 FER1L5A0AVI2 2057 aa17.3■□□□□ 0.36
SMG1-203ENST00000532700 SPENQ96T58 3664 aaKnown RBP17.29■□□□□ 0.36
SMG1-203ENST00000532700 UBA6A0AVT1 1052 aaPredicted RBP17.29■□□□□ 0.36
SMG1-203ENST00000532700 ERI2A8K979 691 aaKnown RBP17.29■□□□□ 0.36
SMG1-203ENST00000532700 IQCF5A8MTL0 148 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 HCRTR1O43613 425 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 FGGP02679 453 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 ST6GAL1P15907 406 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 ACADLP28330 430 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 TERF1P54274 439 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 CSE1LP55060 971 aaKnown RBP17.29■□□□□ 0.36
SMG1-203ENST00000532700 RPS18P62269 152 aaKnown RBP17.29■□□□□ 0.36
SMG1-203ENST00000532700 LAMB3Q13751 1172 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 ZNF789Q5FWF6 425 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 COLEC12Q5KU26 742 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 FAM69BQ5VUD6 431 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 BORAQ6PGQ7 559 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 TRIM73Q86UV7 250 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 PPP1R3BQ86XI6 285 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 REXO1L1PQ8IX06 675 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 HEXDCQ8WVB3 486 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 LCN9Q8WX39 176 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 RANBP9Q96S59 729 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 FRMD8P1Q9BZ68 369 aaPredicted RBP17.29■□□□□ 0.36
SMG1-203ENST00000532700 CHRAC1Q9NRG0 131 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 CIDEBQ9UHD4 219 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 PLAGL1Q9UM63 463 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 JRKLQ9Y4A0 524 aa17.29■□□□□ 0.36
SMG1-203ENST00000532700 SLC5A10A0PJK1 596 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 HEATR9A2RTY3 570 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 GSAPA4D1B5 854 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 KLHL33A6NCF5 533 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 K7EM74 188 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 KIF5CO60282 957 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 CTSBP07858 339 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 NSG1P42857 185 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 LMAN1P49257 510 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 SESN2P58004 480 aaPredicted RBP17.28■□□□□ 0.36
SMG1-203ENST00000532700 HSD11B2P80365 405 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 GPS2Q13227 327 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 ITIH4Q14624 930 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 CCNG2Q16589 344 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 SKIDA1Q1XH10 827 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 DEFB109BQ30KR1 87 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 TTC27Q6P3X3 843 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 KLHL35Q6PF15 583 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 PRELID2Q8N945 189 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 FLVCR1-AS1Q8TAF5 88 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 ZFPM2Q8WW38 1151 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 ELMO1Q92556 727 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 TFGQ92734 400 aaPredicted RBP17.28■□□□□ 0.36
SMG1-203ENST00000532700 KIAA1143Q96AT1 154 aaPredicted RBP17.28■□□□□ 0.36
SMG1-203ENST00000532700 CD180Q99467 661 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 TRIM56Q9BRZ2 755 aaKnown RBP17.28■□□□□ 0.36
SMG1-203ENST00000532700 TRIT1Q9H3H1 467 aaKnown RBP17.28■□□□□ 0.36
SMG1-203ENST00000532700 SRMSQ9H3Y6 488 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 LHX9Q9NQ69 397 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 GEMIN8Q9NWZ8 242 aaKnown RBP17.28■□□□□ 0.36
SMG1-203ENST00000532700 TRMT1Q9NXH9 659 aaKnown RBP17.28■□□□□ 0.36
SMG1-203ENST00000532700 SPHK1Q9NYA1 384 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 PAK5Q9P286 719 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 RARRES3Q9UL19 164 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 CDYLQ9Y232 598 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 BTRCQ9Y297 605 aa17.28■□□□□ 0.36
SMG1-203ENST00000532700 KRT87PA6NCN2 255 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 E7EVH7 732 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 SLC28A2O43868 658 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 AP2A2O94973 939 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 F7P08709 466 aaPredicted RBP17.27■□□□□ 0.36
SMG1-203ENST00000532700 ADRA1DP25100 572 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 ARNTP27540 789 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 NDUFS1P28331 727 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 NMBRP28336 390 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 PRDX3P30048 256 aaKnown RBP17.27■□□□□ 0.36
SMG1-203ENST00000532700 PEBP1P30086 187 aaKnown RBP17.27■□□□□ 0.36
SMG1-203ENST00000532700 CCR7P32248 378 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 CD151P48509 253 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 ERV3-1Q14264 604 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 KRT33BQ14525 404 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 TRIP13Q15645 432 aaPredicted RBP17.27■□□□□ 0.36
SMG1-203ENST00000532700 ZIC1Q15915 447 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 AFTPHQ6ULP2 937 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 CES3Q6UWW8 571 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 PRICKLE2Q7Z3G6 844 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 FAM20CQ8IXL6 584 aa17.27■□□□□ 0.36
SMG1-203ENST00000532700 KRT222Q8N1A0 295 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms