RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PIP5K1AQ99755 562 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 JPH2Q9BR39 696 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 ZPBPQ9BS86 351 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 LRRC2Q9BYS8 371 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 DCLK3Q9C098 648 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 FAM49AQ9H0Q0 323 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 S1PR5Q9H228 398 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 TLE6Q9H808 572 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 OLA1Q9NTK5 396 aaKnown RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 SLCO3A1Q9UIG8 710 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 PCDHA7Q9UN72 937 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 NLRC5Q86WI3 1866 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 BRWD1Q9NSI6 2320 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 OR6C75A6NL08 312 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 USP17L23D6RBM5 183 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 MSH4O15457 936 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 LINC01565O15544 149 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 PSMD10O75832 226 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 SEC31AO94979 1220 aaKnown RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 NDUFB4O95168 129 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 MMP2P08253 660 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 LAMP2P13473 410 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 ETFAP13804 333 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 CHMP24386 653 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 HOXD3P31249 432 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 NRIP1P48552 1158 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 GPC3P51654 580 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 CLCN5P51795 746 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 NLRP11P59045 1033 aaKnown RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 AKAP17AQ02040 695 aaKnown RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 SIGLEC14Q08ET2 396 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 MYBPC2Q14324 1141 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 TBCEQ15813 527 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 CCNG2Q16589 344 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 TMEM266Q2M3C6 531 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 XKR3Q5GH77 459 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 FNBP1LQ5T0N5 605 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 BLOC1S2Q6QNY1 142 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 NEK10Q6ZWH5 1172 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 MAATS1Q7Z4T9 603 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 ECHDC2Q86YB7 292 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 GPR65Q8IYL9 337 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 THNSL1Q8IYQ7 743 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 ADSSL1Q8N142 457 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 LRRC43Q8N309 656 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 PARP16Q8N5Y8 322 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 AADATQ8N5Z0 425 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 MRPL43Q8N983 215 aaKnown RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 BEST2Q8NFU1 509 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 ETNPPLQ8TBG4 499 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 CREB3L4Q8TEY5 395 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 OTULINQ96BN8 352 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 NECTIN4Q96NY8 510 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 TMEM204Q9BSN7 226 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 MRPL9Q9BYD2 267 aaKnown RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 TM6SF1Q9BZW5 370 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 MUC13Q9H3R2 512 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 ESRP2Q9H6T0 727 aaKnown RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 ASAH2Q9NR71 780 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 PCDHB16Q9NRJ7 776 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 CYSLTR2Q9NS75 346 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 SPG21Q9NZD8 308 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 AASSQ9UDR5 926 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 AGO1Q9UL18 857 aaKnown RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 FZD10Q9ULW2 581 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 LSM4Q9Y4Z0 139 aaKnown RBP4.76□□□□□ -1.65
CSDE1-212ENST00000529046 TRIOO75962 3097 aa4.76□□□□□ -1.65
CSDE1-212ENST00000529046 A0A1B0GVT2 93 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 PGPEP1LA6NFU8 196 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 J3KR12 359 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 ASAP2O43150 1006 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 SEC14L5O43304 696 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 LIASO43766 372 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 DKC1O60832 514 aaKnown RBP eCLIP4.75□□□□□ -1.65
CSDE1-212ENST00000529046 STBD1O95210 358 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 SCGB1D1O95968 90 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 GCFC2P16383 781 aaKnown RBP4.75□□□□□ -1.65
CSDE1-212ENST00000529046 NAGAP17050 411 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 AMTP48728 403 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 ENTPD1P49961 510 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 NUDT6P53370 316 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 OLR1P78380 273 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 FOXD4Q12950 439 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-212ENST00000529046 PPP2R5CQ13362 524 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 OLIG2Q13516 323 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 FGFBP1Q14512 234 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 VEPH1Q14D04 833 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 SOWAHCQ53LP3 525 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-212ENST00000529046 SNX30Q5VWJ9 437 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 LRRC8EQ6NSJ5 796 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 ANKRD54Q6NXT1 300 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 MTSS1LQ765P7 747 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 RUFY3Q7L099 469 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 PXKQ7Z7A4 578 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 SLC35F3Q8IY50 421 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 UBALD2Q8IYN6 164 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 SLC39A11Q8N1S5 342 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 METTL13Q8N6R0 699 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 VN1R2Q8NFZ6 395 aa4.75□□□□□ -1.65
CSDE1-212ENST00000529046 PSPC1Q8WXF1 523 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms