RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 COL12A1Q99715 3063 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 GOLGA6L9A6NEM1 432 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 TTLL8A6PVC2 850 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 TMEM150CB9EJG8 249 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 LDB2O43679 373 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 CYP2A7P20853 494 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 PRKG2Q13237 762 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 PARP6Q2NL67 630 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 IZUMO3Q5VZ72 239 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 HOOK3Q86VS8 718 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 SERPINA9Q86WD7 417 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 PANX2Q96RD6 677 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 C19orf43Q9BQ61 176 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 ING2Q9H160 280 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 LATS2Q9NRM7 1088 aa21.74■■□□□ 1.07
TRAPPC4-208ENST00000527680 BTN3A3O00478 584 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 ZNF189O75820 626 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 PDGFAP04085 211 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 ACRV1P26436 265 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 PDHA2P29803 388 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 PGDP52209 483 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 SRSF1Q07955 248 aaKnown RBP eCLIP21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 IL10RAQ13651 578 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 PLEKHS1Q5SXH7 462 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 CPZQ66K79 652 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 AMIGO1Q86WK6 493 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 CLDN19Q8N6F1 224 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 EFCAB3Q8N7B9 438 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 FAM71DQ8N9W8 422 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 ALG3Q92685 438 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 TFGQ92734 400 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 MIB2Q96AX9 1013 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 LRFN5Q96NI6 719 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 KLHL25Q9H0H3 589 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 OR52A5Q9H2C5 316 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 MVB12BQ9H7P6 319 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 ACTR5Q9H9F9 607 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 SYTL2Q9HCH5 934 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 AMFRQ9UKV5 643 aa21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 TNRC6AQ8NDV7 1962 aaKnown RBP21.73■■□□□ 1.07
TRAPPC4-208ENST00000527680 PTPN13Q12923 2485 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 C2orf74A8MZ97 194 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 BTN3A1O00481 513 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 ST6GAL1P15907 406 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 CD151P48509 253 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 LMAN1P49257 510 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 POU6F1Q14863 301 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 LCN10Q6JVE6 187 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 DSELQ8IZU8 1212 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 FAM26EQ8N5C1 309 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 ENDOVQ8N8Q3 282 aaKnown RBP21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 TTC13Q8NBP0 860 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 OR52E1Q8NGJ3 308 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 OR1L3Q8NH93 324 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 N4BP2L2Q92802 583 aaPredicted RBP21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 HGH1Q9BTY7 390 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 TFB2MQ9H5Q4 396 aaKnown RBP21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 XKR8Q9H6D3 395 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 NLE1Q9NVX2 485 aaPredicted RBP21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 SMARCAL1Q9NZC9 954 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 NAV2Q8IVL1 2488 aa21.72■■□□□ 1.07
TRAPPC4-208ENST00000527680 SEC16AO15027 2179 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 VPS4BO75351 444 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 RAB40ALP0C0E4 278 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 PRSS56P0CW18 603 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 CACNG1Q06432 222 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 ABRQ12979 859 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 RPA4Q13156 261 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 ZNF517Q6ZMY9 492 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 PEX26Q7Z412 305 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 KIAA1328Q86T90 577 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 TAB3Q8N5C8 712 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 STYXQ8WUJ0 223 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 CDKN2AIPNLQ96HQ2 116 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 NRTNQ99748 197 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 NLNQ9BYT8 704 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 LACRTQ9GZZ8 138 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 LRRC40Q9H9A6 602 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 PIH1D1Q9NWS0 290 aaKnown RBP21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 VPS4AQ9UN37 437 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 MED13Q9UHV7 2174 aa21.71■■□□□ 1.07
TRAPPC4-208ENST00000527680 PIKFYVEQ9Y2I7 2098 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 IGLV3-16A0A075B6K0 115 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 CCDC78A2IDD5 438 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 BTNL10A8MVZ5 291 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 PSMD3O43242 534 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 METTL18O95568 372 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 PVRP15151 417 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 PTGIRP43119 386 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 BRD3Q15059 726 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 MICALCLQ6ZW33 695 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 UBL4BQ8N7F7 174 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 TRAPPC9Q96Q05 1148 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 ACTR10Q9NZ32 417 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 TCFL5Q9UL49 500 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 G3BP2Q9UN86 482 aaKnown RBP21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 FLNCQ14315 2725 aa21.7■■□□□ 1.06
TRAPPC4-208ENST00000527680 TRBV5-4A0A0C4DH59 114 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 GRID2IPA4D2P6 1211 aa21.69■■□□□ 1.06
TRAPPC4-208ENST00000527680 E7EQ34 232 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms