RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MAP3K3Q99759 626 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 SRMSQ9H3Y6 488 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 PILRAQ9UKJ1 303 aa25.65■■□□□ 1.7
TSPAN4-217ENST00000527644 IGHV5-51A0A0C4DH38 117 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 UBA6A0AVT1 1052 aaPredicted RBP25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 MAGEB16A2A368 324 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 TLCD2A6NGC4 264 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 MATN2O00339 956 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 ARNTP27540 789 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 ACADLP28330 430 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 SH3BP2P78314 561 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 PRKAA1Q13131 559 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 IL11RAQ14626 422 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 MRNIPQ6NTE8 343 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 CYB5D1Q6P9G0 228 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 CARFQ8N187 725 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 OR6C1Q96RD1 312 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 SAMD15Q9P1V8 674 aa25.64■■□□□ 1.7
TSPAN4-217ENST00000527644 SDR42E2A6NKP2 422 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 BHMG1C9JSJ3 638 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 NDUFS3O75489 264 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 PAMP19021 973 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 CCR7P32248 378 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 PPP1R7Q15435 360 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 KIAA0930Q6ICG6 404 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 CASC4Q6P4E1 433 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 NAPRTQ6XQN6 538 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 SDCCAG8Q86SQ7 713 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 VASH2Q86V25 355 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 LRRC6Q86X45 466 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 OR52E1Q8NGJ3 308 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 SERPINB12Q96P63 405 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 NAPGQ99747 312 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 ASF1AQ9Y294 204 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 TMEM184BQ9Y519 407 aaPredicted RBP25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 MGAQ8IWI9 3026 aa25.63■■□□□ 1.69
TSPAN4-217ENST00000527644 RAD1O60671 282 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 ITGB6P18564 788 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 POLR2CP19387 275 aaPredicted RBP25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 RHDQ02161 417 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 PRKG2Q13237 762 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 SRSF6Q13247 344 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 SOWAHCQ53LP3 525 aaPredicted RBP25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 PTRHD1Q6GMV3 140 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 PPIL6Q8IXY8 311 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 TBC1D21Q8IYX1 336 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 CACNA2D3Q8IZS8 1091 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 OTUD6BQ8N6M0 293 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 IL22RA1Q8N6P7 574 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 NAT8LQ8N9F0 302 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 SIDT2Q8NBJ9 832 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 ASZ1Q8WWH4 475 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 SLCO2A1Q92959 643 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 HGH1Q9BTY7 390 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 DDX47Q9H0S4 455 aaKnown RBP25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 P2RY12Q9H244 342 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 PCYOX1Q9UHG3 505 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 POLG2Q9UHN1 485 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 GNPTGQ9UJJ9 305 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 SAR1BQ9Y6B6 198 aa25.62■■□□□ 1.69
TSPAN4-217ENST00000527644 FAM237BA0A1B0GVD1 139 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 GOLGA8MH3BSY2 632 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 PFDN6O15212 129 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 STK17BO94768 372 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 RPS3P23396 243 aaKnown RBP eCLIP25.61■■□□□ 1.697e-9■■■■■ 36.4
TSPAN4-217ENST00000527644 MAP4P27816 1152 aaKnown RBP25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 ARCN1P48444 511 aaKnown RBP25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 ARL4DP49703 201 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 KPNA2P52292 529 aaKnown RBP25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 AMIGO1Q86WK6 493 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 NLGN4XQ8N0W4 816 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 NLGN4YQ8NFZ3 816 aaPredicted RBP25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 OR5AR1Q8NGP9 310 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 PANX3Q96QZ0 392 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 TCF12Q99081 682 aa25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 TRIT1Q9H3H1 467 aaKnown RBP25.61■■□□□ 1.69
TSPAN4-217ENST00000527644 IQCF5A8MTL0 148 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 GPC4O75487 556 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 ZBTB11O95625 1053 aaPredicted RBP25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 APOA4P06727 396 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 FGF5P12034 268 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 HSD11B2P80365 405 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 ACY1Q03154 408 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 HSPA14Q0VDF9 509 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 RNF187Q5TA31 235 aaPredicted RBP25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 CREG2Q8IUH2 290 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 SLC22A15Q8IZD6 547 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 OR5K2Q8NHB8 316 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 LKAAEAR1Q8TD35 194 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 CAPZA3Q96KX2 299 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 PDE7BQ9NP56 450 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 POMT2Q9UKY4 750 aa25.6■■□□□ 1.69
TSPAN4-217ENST00000527644 LOC400499M0QZD8 3231 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 GSAPA4D1B5 854 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 CTAGE9A4FU28 777 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 GOLGA8KD6RF30 607 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 GOLGA8TH3BQL2 631 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 BTN3A3O00478 584 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 DLGAP3O95886 979 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 AOAHP28039 575 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms