RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TWF1Q12792 350 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 DNAJC14Q6Y2X3 702 aaPredicted RBP11.44□□□□□ -0.58
LINC01001-201ENST00000526704 ZDHHC13Q8IUH4 622 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 HDAC2Q92769 488 aaKnown RBP11.44□□□□□ -0.58
LINC01001-201ENST00000526704 PLD4Q96BZ4 506 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 GLT1D1Q96MS3 346 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 BOCQ9BWV1 1114 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 OSBPL10Q9BXB5 764 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 CIPCQ9C0C6 399 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 ADNPQ9H2P0 1102 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 GKN1Q9NS71 199 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 FAM118AQ9NWS6 357 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 TMEM161AQ9NX61 479 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 USE1Q9NZ43 259 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.44□□□□□ -0.58
LINC01001-201ENST00000526704 ADGRE2Q9UHX3 823 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 PKP3Q9Y446 797 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 OARD1Q9Y530 152 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 PCDHGA8Q9Y5G5 932 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 GMNNO75496 209 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 CST1P01037 141 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 ALPIP09923 528 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 BMP1P13497 986 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 MAP4P27816 1152 aaKnown RBP11.44□□□□□ -0.58
LINC01001-201ENST00000526704 TUBA3CQ13748 450 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 CTU2Q2VPK5 515 aaKnown RBP11.44□□□□□ -0.58
LINC01001-201ENST00000526704 SPANXN4Q5MJ08 99 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 GTF2IRD2BQ6EKJ0 949 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 PRSS55Q6UWB4 352 aaPredicted RBP11.44□□□□□ -0.58
LINC01001-201ENST00000526704 FAM151BQ6UXP7 276 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 TAS1R1Q7RTX1 841 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 GTF2IRD2Q86UP8 949 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 ZBTB46Q86UZ6 589 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 TMEM173Q86WV6 379 aaPredicted RBP11.44□□□□□ -0.58
LINC01001-201ENST00000526704 LIX1Q8N485 282 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 KRTCAP2Q8N6L1 136 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 CHDHQ8NE62 594 aaPredicted RBP11.44□□□□□ -0.58
LINC01001-201ENST00000526704 PDZD8Q8NEN9 1154 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 GIPC3Q8TF64 312 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 ZBTB18Q99592 522 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 FEM1AQ9BSK4 669 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 ACTR8Q9H981 624 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 HPS4Q9NQG7 708 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 LIMD1Q9UGP4 676 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 PCDHB9Q9Y5E1 797 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 PRSS21Q9Y6M0 314 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 SLC30A1Q9Y6M5 507 aa11.44□□□□□ -0.58
LINC01001-201ENST00000526704 ZNF840PA6NDX5 716 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 NT5C1B-RDH14C9J2C7 533 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 CXCR6O00574 342 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 ADAM12O43184 909 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 RGS14O43566 566 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 HNRNPCP07910 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC01001-201ENST00000526704 IRF1P10914 325 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 RPS3P23396 243 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC01001-201ENST00000526704 GSTM2P28161 218 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 HMGCLP35914 325 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 GDF5P43026 501 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 HMGCS1Q01581 520 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 SMARCB1Q12824 385 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 MAPKAPK3Q16644 382 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 MOGQ16653 247 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 PHKG1Q16816 387 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 GTDC1Q4AE62 458 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 ATXN7L2Q5T6C5 722 aaPredicted RBP11.43□□□□□ -0.58
LINC01001-201ENST00000526704 PTRHD1Q6GMV3 140 aaKnown RBP11.43□□□□□ -0.58
LINC01001-201ENST00000526704 RBM23Q86U06 439 aaKnown RBP11.43□□□□□ -0.58
LINC01001-201ENST00000526704 SERPINA9Q86WD7 417 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 GALNT13Q8IUC8 556 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 SPARTQ8N0X7 666 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 CARNMT1Q8N4J0 409 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 CHCHD4Q8N4Q1 142 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 BPIFB6Q8NFQ5 453 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 C2orf15Q8WU43 125 aaKnown RBP11.43□□□□□ -0.58
LINC01001-201ENST00000526704 SDCCAG3Q96C92 435 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 PLEKHA8Q96JA3 519 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 CASD1Q96PB1 797 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 CSF3RQ99062 836 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 THUMPD3Q9BV44 507 aaKnown RBP11.43□□□□□ -0.58
LINC01001-201ENST00000526704 GPR63Q9BZJ6 419 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 CLPBQ9H078 707 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 CLMPQ9H6B4 373 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 ZFP14Q9HCL3 533 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 SLC6A13Q9NSD5 602 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 EIF3LQ9Y262 564 aaKnown RBP11.43□□□□□ -0.58
LINC01001-201ENST00000526704 TRBV5-3A0A0A0MS03 114 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 ELOVL7A1L3X0 281 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 PRAMEF1O95521 474 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 AKT1P31749 480 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 NRIP1P48552 1158 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 C21orf59P57076 290 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 GABARAPL2P60520 117 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 PRKCZQ05513 592 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 SKIV2LQ15477 1246 aaKnown RBP11.43□□□□□ -0.58
LINC01001-201ENST00000526704 MEP1AQ16819 746 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 RUNDC3AQ59EK9 446 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 HECTD3Q5T447 861 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 TTC23Q5W5X9 447 aa11.43□□□□□ -0.58
LINC01001-201ENST00000526704 LAIR2Q6ISS4 152 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms